@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_34_0030: (2018-03-12 )
MGNYFSLCPEPFHGLISSYGIGSTSSTHPSGVAVKGQEYSAVKLVGEGGYSFVYEGYNNASGQRVALKRYVFSETQQQQGAVEEMSIYRDVCPNDYIVTYLDSEVVYRHGVPLPEMWVVMEFCDGPSLQEYINNRLRSPQPFSVREVFEIVDNIVHAIGHLHSQSPPVSHWDIKPENFLFTDTGRLKLCDFGSATRQFYAPTSAEEVSAAESELGSRMTLLYRPPESLDLWSKDRVDTKADIWALGVIIYVLVFREMPFDANPMEVMAAVPKRYKGKTQEGCPEEFRALMDIVRTKMLTKKPADRADIFAISEELEGITHLPPLSRPRPGFQSAQRPRFA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3JW_A_4(4W9X)
BMP2K_HUMAN
[Raw transfer]




6BU_A_2(5IKW)
BMP2K_HUMAN
[Raw transfer]




4OR_A_5(4ZJJ)
PAK1_HUMAN
[Raw transfer]




6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]




4OQ_A_5(4ZJI)
PAK1_HUMAN
[Raw transfer]




EDO_A_4(4W9W)
BMP2K_HUMAN
[Raw transfer]




TRS_A_4(2F57)
PAK5_HUMAN
[Raw transfer]




26 HHSearch 95.2531%-129 - C1 -5TE0 - AAK1_HUMAN -
3 PsiBlast_PDB 91.2131%-114 - C1 -4WSQ - AAK1_HUMAN -
2 PsiBlast_PDB 86.9632%-113 - C1 -5TE0 - AAK1_HUMAN -
8 PsiBlast_PDB 86.1231%-113 - C1 -5I3O - BMP2K_HUMAN -
9 PsiBlast_PDB 84.7631%-110 - C1 -5I3R - BMP2K_HUMAN -
7 PsiBlast_PDB 84.0131%-111 - C1 -5IKW 5.9 BMP2K_HUMAN
5 PsiBlast_PDB 83.9531%-114 - C1 -4W9W 1.0 BMP2K_HUMAN
6 PsiBlast_PDB 83.1531%-114 - C1 -4W9X 5.9 BMP2K_HUMAN
1 PsiBlast_PDB 81.6932%-112 - C1 -5L4Q - AAK1_HUMAN -
4 PsiBlast_PDB 75.9230% -8 - C1 -4C57 - GAK_HUMAN -
31 HHSearch 73.2222%-127 - C1 -2BUJ - STK16_HUMAN -
30 HHSearch 63.3324%-106 - C1 -4XBR - INKA1_HUMAN (first) -
44 Fugue 62.6120% -36 - C1 -1KOB - ? -
48 Fugue 62.4722% -59 - C1 -1TKI - TITIN_HUMAN -
17 PsiBlast_PDB 61.5727% -55 - C1 -4FIF - PAK4_HUMAN -
18 PsiBlast_PDB 61.3227% -52 - C1 -4FIG - ? -
11 PsiBlast_PDB 61.1027% -54 - C1 -2F57 3.7 PAK5_HUMAN
14 PsiBlast_PDB 61.0827% -54 - C1 -4FIE - PAK4_HUMAN -
10 PsiBlast_PDB 60.8826% -2 - C1 -2BUJ - STK16_HUMAN -
16 PsiBlast_PDB 59.8227% -57 - C1 -4XBU - PAK4_HUMAN -