@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_34_0990: (2018-03-12 )
MRAKIDDENSSVAVTLLPSAQVEPLASSQPPTRTGAVGTMVNTDAIDARGNDAESSGGGSAPSSMATTTTINAVFYNPSAQLPTPPPLHRNSSSPAPMQHLQHEEPQRLRAVPYFPASCESDSNEEPLFQHPPPAKPRAPLRPAPQSGRLWGAVSATPSSAGFVSGGTAPYASLLHTSSAPAVADTETSSTTAGHGLVVGCETSNHCLPASIKAHPPASATSPASIHGGYSDSVSDSTATTTVGNHSSGGRGLRRPPLMTGPNGAAVPLASPMLSGPQGRWVRSSGDESSSGFATLAVPAAPANLGDTVLVAEPPTPTKQRRTIHTGMGNTVSLSCGGIGAAPRLSTSAAASTGTCASAAAATSAAAVAGGASPKPSLRIAAPFRGLGYNPAANSVSAPASRATTSSMSTAPPPPSFKCYRREGSRKRSADVLSQFSALDLDETPATPFAQTGTSRFTSINHNGNGHNAFPSQPSPSTAVYRGAGGGSNAISTVSPLTIDYATPVALSQQIGGSNTFSQVLLHPSQDVLDMSQAETECSNFLARRILKEYNEVRLLGSGSFGTVSLFKEISSGEYVAVKMSPPLRTPEMERRYRRERSVMGMVRGLPHVVQLSAAWEEGRVPRMYLQLEYCPGGSVASVANAKQSRNEPWPEAEVKVFLAHMSIALDALHRANIAHVDFKPDNVLVDKDGAYKLSDFGCSVLLDERGRPRPETRNGYGSLARGQRAGWVGGVACANPNGGPAVHTGAGVGAGGLGSSLDFNNWNEGNELSTMSIDEGDCRYLCADMLNEKQHFKAGDMFSLGMSLFELMSGQPLPRNGDQFLALRRRVPVEVLRRRGYSADLVELVVALLRSDPPQRPTARQVLQYLRLSSEELQLLSSASAMKRWTESAESFLQLQEEERQQPPLGKDGVLAATVDALRCVSALMEASMWLFTTTQQDVHRLAAPANAGKGEDEEDERRRQQTQQPQPQPLLQLPRGQQLEDLPMSPIQCDEACTPTALNY

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4KK_A_3(4YVE)
ROCK1_HUMAN
[Raw transfer]



4TW_A_3(5BML)
ROCK1_HUMAN
[Raw transfer]



M77_E_5(2F2U)
ROCK2_BOVIN
[Raw transfer]



6U1_A_3(5KKS)
ROCK1_HUMAN
[Raw transfer]



4KH_A_3(4YVC)
ROCK1_HUMAN
[Raw transfer]



65R_A_3(5HVU)
ROCK1_HUMAN
[Raw transfer]



M77_D_4(2ESM)
ROCK1_HUMAN
[Raw transfer]



H52_A_3(3D9V)
ROCK1_HUMAN
[Raw transfer]



Y27_C_3(2H9V)
ROCK2_BOVIN
[Raw transfer]



Y27_C_3(2ETR)
ROCK1_HUMAN
[Raw transfer]



HFS_C_3(2ETK)
ROCK1_HUMAN
[Raw transfer]



1WU_A_3(4L6Q)
ROCK2_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
52 Fugue 69.0316% 6 - C1 -3C4Z - RK_BOVIN -
33 HHSearch 67.9424% -86 - C1 -4XBR - INKA1_HUMAN (first) -
35 HHSearch 65.3625% -86 - C1 -5K00 - MELK_HUMAN -
29 HHSearch 64.3228% -2 - C1 -2Y7J - PHKG2_HUMAN -
44 HHSearch 63.8223% -67 - C1 -4IDV - M3K14_HUMAN -
51 Fugue 63.0717% 31 - C1 -2ACX - GRK6_HUMAN -
54 Fugue 62.7723% -42 - C1 -5KCV - AKT1_HUMAN -
30 HHSearch 61.7728% 2 - C1 -2Y7J - PHKG2_HUMAN -
24 HHSearch 59.5323% -13 - C1 -3C0I - CSKP_HUMAN -
23 HHSearch 58.5423% -14 * C1 *3C0G - CSKP_HUMAN -
53 Fugue 58.0421% 11 - C1 -4XHG - ? -
42 HHSearch 57.1823% -71 - C1 -4G3F - -
41 HHSearch 57.1419% -66 - C1 -3CBL - -
37 HHSearch 56.7919% -63 - C1 -3BKB - -
31 HHSearch 55.2724% -66 - C1 -2X4F - MYLK4_HUMAN -
48 Fugue 51.7618% 6 - C1 -1KOB - ? -
26 HHSearch 51.5421% -58 - C1 -1TKI - TITIN_HUMAN -
32 HHSearch 50.8622% -49 - C1 -4NIF - KS6A1_HUMAN -
49 Fugue 50.4218% -33 - C1 -1TKI - TITIN_HUMAN -
47 Fugue 47.1218% -28 - C1 -2RIO - IRE1_YEAST -
16 PsiBlast_PDB 41.9633% -53 - C1 -4YVC 5.2 ROCK1_HUMAN
5 PsiBlast_PDB 40.5331% 10 - C1 -4L6Q 4.5 ROCK2_HUMAN
1 PsiBlast_PDB 35.7330% 14 - C1 -2F2U 4.8 ROCK2_BOVIN
12 PsiBlast_PDB 35.4933% -1 - C1 -2ETR 4.2 ROCK1_HUMAN
2 PsiBlast_PDB 35.3530% 9 - C1 -2H9V 4.8 ROCK2_BOVIN
20 PsiBlast_PDB 34.6633% -1 - C1 -5KKS 7.6 ROCK1_HUMAN
11 PsiBlast_PDB 34.0533% 2 - C1 -2ETK 4.6 ROCK1_HUMAN
17 PsiBlast_PDB 33.9233% -2 - C1 -4YVE 6.3 ROCK1_HUMAN
18 PsiBlast_PDB 33.2533% -2 - C1 -5BML 6.3 ROCK1_HUMAN
13 PsiBlast_PDB 32.6633% 2 - C1 -3D9V 5.3 ROCK1_HUMAN