@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_34_1840: (2018-03-12 )
MPPKLKPLPAKKSTLPPELPEESDELTVGNIRVGPRGVEFTGEGDLQVRRPDLNFENLKRVRQLGQGTQGNVSMYVTADKSVFAVKKITIPVTLDTRTRQTVAAELRNIFSAQSNEYTVNLYNAFYRNRALRLVMEYMDWGNIDELIAEKVKIPPTVCGYIASQMLHALAVLHTKSNIVTEPNQHKSLRQIHRDIKPANVLLSTTGCVKLADFGIATSAETIGVNSFVGTATYMSPERIQGRRYSTPSDIWSVGVVVAQMLLGHYPFSSVSKGFMALLREINSVEKYPLMDETGCSQETQDFIDSCLRQDPDDRSSAFELLESPWIKYCEEHGKAEMVALLASLGDRNRQYREDDALQAASRETSSLSLPRDTSETCKADNPLGM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]



3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]



CHU_A_4(3WIG)
MP2K1_HUMAN
[Raw transfer]



3BM_A_2(3EQC)
MP2K1_HUMAN
[Raw transfer]
2 PsiBlast_PDB 85.4331% -95 - C1 -3ORN - MP2K1_HUMAN -
4 PsiBlast_PDB 85.3531%-100 - C1 -3WIG 7.5 MP2K1_HUMAN
10 PsiBlast_PDB 83.7328%-101 - C1 -3EQD - MP2K1_HUMAN -
9 PsiBlast_PDB 83.5528%-103 - C1 -3EQC 5.2 MP2K1_HUMAN
14 PsiBlast_PDB 83.5428% -99 - C1 -3EQI - MP2K1_HUMAN -
8 PsiBlast_PDB 83.2030% -76 - C1 -4ANB - MP2K1_HUMAN -
13 PsiBlast_PDB 82.8728%-101 - C1 -3EQH - MP2K1_HUMAN -
1 PsiBlast_PDB 82.5732% -85 - C1 -3SLS - MP2K1_HUMAN -
11 PsiBlast_PDB 82.5528%-102 - C1 -3EQF - MP2K1_HUMAN -
3 PsiBlast_PDB 82.3131%-106 - C1 -3OS3 - MP2K1_HUMAN -
12 PsiBlast_PDB 81.9628%-100 - C1 -3EQG - MP2K1_HUMAN -
19 PsiBlast_PDB 81.3527%-107 - C1 -4U7Z - MP2K1_HUMAN -
5 PsiBlast_PDB 81.2430% -79 - C1 -4AN2 - MP2K1_HUMAN -
20 PsiBlast_PDB 80.8427%-109 - C1 -4U80 - MP2K1_HUMAN -
7 PsiBlast_PDB 80.7430% -79 - C1 -4AN9 - MP2K1_HUMAN -
18 PsiBlast_PDB 80.3227%-111 - C1 -3W8Q - MP2K1_HUMAN -
15 PsiBlast_PDB 80.2828% -92 - C1 -5HZE - MP2K1_HUMAN -
6 PsiBlast_PDB 79.8630% -79 - C1 -4AN3 - MP2K1_HUMAN -
16 PsiBlast_PDB 79.2527%-113 - C1 -2Y4I - MP2K1_RABIT -
17 PsiBlast_PDB 77.5127%-111 - C1 -5KKR - MP2K1_RABIT -