@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_35_1020: (2018-03-12 )
MSSTLENCLVQGGRFRVGRRIGGGSFGEIFLGVDTQTGEAVAIKVERSKAVHPQLFSESRYYTLLSQGRGAAYMPTIFGYSSECEFNVMAMELMGFSLEDLHEKCGSRFSLKTTLMLADQILWLIELVHSHSILHRDIKPDNFIMGRGKKAHHVHIIDFGLAKKYRDSQTNMHIPYKEGKSLTGTARYCSINTHLGAEQSRRDDMEGIAYLLIYFLRGSLPWQGLKTATKEQKYGLIAHVKMSTSVESLCKGLPIEFASFLNYSRALRFEDRPDYGYLRSMFRRLFEREGYQEDYVYDWTVRSMYETLTARQRKNAAKRGKKQK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PFO_A_3(4TN6)
KC1D_HUMAN
[Raw transfer]




0CK_A_5(3UYT)
KC1D_HUMAN
[Raw transfer]




1QM_A_5(4KBA)
KC1D_HUMAN
[Raw transfer]




1QJ_A_3(4KBC)
KC1D_HUMAN
[Raw transfer]




1QN_A_5(4KB8)
KC1D_HUMAN
[Raw transfer]




0CK_A_3(3UZP)
KC1D_HUMAN
[Raw transfer]




1QG_A_5(4KBK)
KC1D_HUMAN
[Raw transfer]




9WG_A_5(5W4W)
KC1D_HUMAN
[Raw transfer]




16W_A_3(4HNI)
KC1E_HUMAN
[Raw transfer]




2KC_A_2(4NFN)
TTBK1_HUMAN
[Raw transfer]




BRK_A_2(2IZR)
KC1G3_HUMAN
[Raw transfer]




AUG_A_6(5IH6)
KC1D_HUMAN
[Raw transfer]




37J_A_9(4TWC)
KC1D_HUMAN
[Raw transfer]




37J_B_18(4TWC)
KC1D_HUMAN
[Raw transfer]




386_A_12(4TW9)
KC1D_HUMAN
[Raw transfer]




37J_A_9(4TWC)
KC1D_HUMAN
[Raw transfer]




16W_A_3(4HNF)
KC1D_HUMAN
[Raw transfer]




DTQ_A_3(4BTK)
TTBK1_HUMAN
[Raw transfer]




15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]




F8E_B_10(4BTM)
TTBK1_HUMAN
[Raw transfer]




ADP_A_2(4XHG)
?
[Raw transfer]




2 PsiBlast_PDB 94.9160%-105 - C1 -4TN6 8.5 KC1D_HUMAN
4 PsiBlast_PDB 94.1560% -97 - C1 -3UYT 8.0 KC1D_HUMAN
23 HHSearch 93.9260% -96 - C1 -4TWC 4.4 KC1D_HUMAN
22 HHSearch 93.3760%-100 - C1 -4TWC 8.0 KC1D_HUMAN
10 PsiBlast_PDB 93.0460%-100 - C1 -1CKJ - KC1D_RAT -
16 PsiBlast_PDB 92.8560%-102 - C1 -4KBK 7.1 KC1D_HUMAN
19 PsiBlast_PDB 92.7360% -97 - C1 -4TWC 7.9 KC1D_HUMAN
5 PsiBlast_PDB 92.7260% -96 - C1 -3UZP 8.1 KC1D_HUMAN
13 PsiBlast_PDB 92.2860% -99 - C1 -5MQV - KC1D_HUMAN -
48 Fugue 92.0150%-105 - C1 -4XHG 3.8 ?
27 HHSearch 91.8158%-113 - C1 -5FQD - KC1A_HUMAN -
17 PsiBlast_PDB 91.8060% -94 - C1 -5W4W 7.4 KC1D_HUMAN
7 PsiBlast_PDB 91.6360%-104 - C1 -4HGT 6.9 KC1D_HUMAN
29 HHSearch 91.4060%-102 - C1 -3SV0 - ? -
12 PsiBlast_PDB 91.1560% -96 - C1 -4KBC 6.6 KC1D_HUMAN
11 PsiBlast_PDB 91.0960%-102 - C1 -1CKI - KC1D_RAT -
8 PsiBlast_PDB 90.6360%-107 - C1 -4JJR - KC1D_MOUSE -
6 PsiBlast_PDB 90.3360% -99 - C1 -4HNF 6.5 KC1D_HUMAN
9 PsiBlast_PDB 90.1660%-101 - C1 -5IH6 6.0 KC1D_HUMAN
18 PsiBlast_PDB 90.0260%-102 - C1 -4TW9 6.0 KC1D_HUMAN
14 PsiBlast_PDB 88.6560%-112 - C1 -4KB8 7.1 KC1D_HUMAN
15 PsiBlast_PDB 86.5260%-109 - C1 -4KBA 7.4 KC1D_HUMAN
20 PsiBlast_PDB 85.7258% -93 - C1 -4HNI 6.4 KC1E_HUMAN
24 HHSearch 79.4450% -58 - C1 -2IZR 4.5 KC1G3_HUMAN