@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_35_1070: (2018-03-13 )
MTVLPPKINVPATPALDGVDINSLYDVNHGKLLGKGGFSEVLAVRHIPSGEIRALKVMMRSSLVGKKAEMVAHEKEILRRTCHPAIITLHEAVQTPDKVYFALDLMNEDLFEFIVRNKTVNEDLSRAIMHQLMSGIAYLHEQSIVHRDIKPENILINVVVKSEANNAANDDSESATRVEGLQVMSDINSIPLEKLNVEVKIADFGLAKVVMEWDVCSTPCGTSFYIAPEVIRGIEEQGAKPLCTNQRLVKSVDVWSAGVVFYVLLCGRPPFHGQVRTGQDRRDLLRRIDHGVLFNPNHGWDSISAEAKNLILKMLDQESSKRITSDEVLRHPFFTAHGYSRPVPASDARRRFMQMQQLSLRTKVPAAQSAEAQVKTMSPLSGPDGQQIKVSSSGGGSSSKGSSNSTGSFLSSIKDFFGHRSKHTSDISKEERQRMHAELAELQATVIAEEDQEGDVTSYKPSMPVKEAKPARTAVMNMKAKVGPDALRK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(3IGO)
?
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



AMP_A_6(4Y5Q)
?
[Raw transfer]



VGG_A_2(2WEI)
?
[Raw transfer]



BK1_A_5(3NCG)
?
[Raw transfer]



BK3_A_6(3MWU)
?
[Raw transfer]



GOL_A_9(3HZT)
?
[Raw transfer]



GOL_A_4(3HZT)
?
[Raw transfer]



DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]



1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]



DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]
27 HHSearch 74.1036% -71 - C1 -2BDW - KCC2D_CAEEL -
53 Fugue 73.7225% 45 - C1 -2ACX 4.7 GRK6_HUMAN
10 PsiBlast_PDB 67.6233% -65 - C1 -5JZJ - DCLK1_HUMAN -
20 PsiBlast_PDB 67.5629% -21 - C1 -5U6Y - KCC2A_RAT -
28 HHSearch 67.2335% -69 - C1 -5IG1 - ? -
5 PsiBlast_PDB 67.1332%-127 - C1 -3DFA - ? -
18 PsiBlast_PDB 67.1032% -68 - C1 -3KK8 - KCC2D_CAEEL -
38 HHSearch 66.6131% -55 - C1 -3C0I - CSKP_HUMAN -
39 HHSearch 66.2331% -55 - C1 -3C0G - CSKP_HUMAN -
13 PsiBlast_PDB 65.6932% -63 - C1 -2BDW - KCC2D_CAEEL -
30 HHSearch 65.0035% -68 - C1 -5IG1 - ? -
2 PsiBlast_PDB 63.5232% -63 - C1 -3MWU 6.0 ?
11 PsiBlast_PDB 62.8733% -54 - C1 -5JZN - DCLK1_HUMAN -
45 Fugue 62.5926% 32 - C1 -1KOB - ? -
3 PsiBlast_PDB 62.3832% -65 - C1 -3NCG 5.1 ?
4 PsiBlast_PDB 62.2532% -61 - C1 -4Y5Q 4.6 ?
24 HHSearch 61.9230% -19 - C1 -2X0G - DAPK1_HUMAN -
32 HHSearch 61.7733% -16 - C1 -2Y7J - PHKG2_HUMAN -
6 PsiBlast_PDB 61.6132% -61 - C1 -2WEI 6.2 ?
1 PsiBlast_PDB 61.4632% -63 - C1 -3IGO 5.4 ?
17 PsiBlast_PDB 53.4731% -55 - C1 -2JAM 2.0 KCC1G_HUMAN
7 PsiBlast_PDB 53.4632% -16 - C1 -3HZT 3.0 ?