@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_35_2370: (2018-03-13 )
MITSRGKASGHVKPSSPASAKDAAPFFAAAPTAVTASKTSYSRNDGHNPLINDLLKDLDKNSSPEDVHGAGHVQEQSVSNANSFSNFDLQLRRPSEESTASCRSSARNRDKTATDILCKTGQHFVHAMRMHNLEDFFCPAHGESAEDVLRRQLRKKDQEEVEAVVLTLVELLEEVRKARGQLVPLAGSLSLLDTSGRKRTSFNSMHSAVSTASLMRPPVHETNQLAMAYDQQGNRMINCYRVIANLGRGAYGKVKLGVDTNTGQMVAIKIIDKKLLKRIGGLGSSNQEAALKREIAIMKKVRHRNCVSLYEVIDDPDSHILYLIMEYVPNGPVVRLKPQELSSTALESIEAGIPLNGEVCNKALIRCAVRQSANGDTASLTDAEINSNPTIFLCKPLSQHICALYLRQLVSGLRYMHKRNLVHHDIKPDNILVGTNHHVFLSDFGVSEILSTRHEVKNAVKKNRGSMSDDLISEHSFESDGSDSTNDDGVGSKPRLGGGTLLFTAPELFDSSVNKKLLDPHLTDVWALGVTLYCMLVGMSPFFGNTYADVRANILTQRYPWCGKTIYGTLLAAEWRVVLNGLLAKNPNNRWSLARLKSFLDQHSFQYAMRQSAFLEASTRTRSLTSVDGDASPSTSTAQRAAGLAASSTGTFAKGLKLPLACSSVAKDKNASILLPRVVSSPRAVSALSMEAGGAARSFLWDLGVSEKEVRGATRTVKVEVVRQTTVLSAHTRTIVRRYVEWIRACMHARNFIPLGCAPPLSRKSLVGSLVSMQMCADANKSSKTLTASREKAHVTHVPVLAVAARCHRTSEAGPIGTRSSLFPPRRSPHSPAGDTRKGRQRSGSRSSNDGGGRALTRGSLESRASDGRLQSLDAALSIVNLQSTFDEHSLTFSLTSSSASSQASFSSQHGYSGQQPGRETRTNNGILAGNLATPSEDTPAPRNGMAEKVSWCNAQMPSTVAQTMVPSSATPSSIAEEDSRKRVGAKGSKSRFQQFMRRKKTPSGASVSDDLTSYQSTFAPKSNSAVSPLLDSVLCSGISGLGDSNSAGCCSTHHNPKTVSTTDRCLAAPPDEHLSVVQSPGSVGNKHPVGPMQERLSDGKLAVLALTSFEQVPHVTVSKRLSSVFRK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4GV1)
AKT1_HUMAN
[Raw transfer]



609_A_2(2ZV2)
KKCC2_HUMAN
[Raw transfer]



8R7_A_2(5UYJ)
KKCC2_HUMAN
[Raw transfer]



8R4_A_2(5UY6)
KKCC2_HUMAN
[Raw transfer]



GOL_A_4(3HZT)
?
[Raw transfer]



J60_A_7(3HZT)
?
[Raw transfer]
44 HHSearch 69.4528%-119 - C1 -5J5T - M4K3_HUMAN -
30 HHSearch 67.5629%-155 - C1 -5K00 - MELK_HUMAN -
38 HHSearch 67.2527% -70 - C1 -4GV1 Error AKT1_HUMAN
36 HHSearch 67.1727% -69 - C1 -2X0G - DAPK1_HUMAN -
45 Fugue 66.4823% -45 - C1 -1TKI - TITIN_HUMAN -
3 PsiBlast_PDB 66.0826% -11 - C1 -5UYJ 7.6 KKCC2_HUMAN
46 Fugue 65.3422% -34 - C1 -1KOB - ? -
42 HHSearch 65.2725%-111 - C1 -3C0G - CSKP_HUMAN -
2 PsiBlast_PDB 64.0226% 9 - C1 -5UY6 8.3 KKCC2_HUMAN
41 HHSearch 63.5825%-113 - C1 -3C0I - CSKP_HUMAN -
22 HHSearch 62.2925% -82 - C1 -1TKI - TITIN_HUMAN -
52 Fugue 61.3420% -44 - C1 -4EUT - TBK1_HUMAN -
21 HHSearch 60.8029% -80 - C1 -2X4F - MYLK4_HUMAN -
40 HHSearch 60.3229%-172 - C1 -4JXF - PLK4_HUMAN -
28 HHSearch 60.2524% -49 * C1 *2Y7J - PHKG2_HUMAN -
29 HHSearch 59.3624% -47 - C1 -2Y7J - PHKG2_HUMAN -
4 PsiBlast_PDB 58.3726% -14 - C1 -5VT1 - KKCC2_HUMAN -
1 PsiBlast_PDB 57.8526% 2 - C1 -2ZV2 7.2 KKCC2_HUMAN
39 HHSearch 56.6428% -32 - C- -4OTD - PKN1_HUMAN -
32 HHSearch 56.2723% -84 - C1 -3BKB - -