@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_35_4110: (2018-03-13 )
MLGTVDAIDYDGDRLHKVVLRFPAVRSGESEIVKEVWPCERIGQGSFGTVYRAVSSDYPRLALKISTGKSTRLRQELDVLSRVCTKGRLLLPRFEFGALNKTADLIVIGMELCVPSTLHDLLLSTRITSEAEMLFMAHQAVQAVSYVHAEGCIHRDIKLQNFVFDLDGNLKLIDFGLACNSLKPPAGDVVAGTVSFMSPEMAHNALHKDRRVSVGVAADVWSLGIVLFSIFTQRNPYPAPETPAPAAGSTPGGAGAAGVTGRGDITHGAEGEKGNDLSQQHRMNERLLRRVAAGDWQWPVGVTVSQDLKQLVNSILVVNPEERPSVSTILENKLWNLRRRYPPAAVAAFLGVQDDFLLSHDEAHLMRAVEERSAGVAASLRNSRLHSPASASNEDNGETDAQHSSSGSARNGGLNTSGATTSPARSSLKVVQRCGEGGIDGAVTVQVYDVRASTRKRSKPIREISVVMAEETAKTRRSKSARRATGAVSAPSSRVVSRAASTEYSRRIAPPAGARLQSSAAHTCANSGDDEGEAEAEAVNRGTSTSQRHSRGMSPVRLQDALETAGSVAAGQRDSVGHPKALVEPSCATPPLLTSGKQQPLSEHMRPDIQRSGSVELLEDAEAPTEASAMPTSHKRAASSGKKRRDASLRQPSSLILKGSTRDLSADAPRSTTTAASTQASTSLLASRTTLPLSAVNPSPSSSRQASLRRQASASAAAVSSAQGCAGHRGSSPVMKRAQRVALELGLDVIWHDEADHRRALSAMLLIEHAWLLASFRLTIEEDQERYSITWLAEEQEKSAAHPHRFKEVMQVMSKKYQYGFVCDMCDYEFLPTGPGEKDLHFFHCPCGRDLCPDCYTAYQRQCTCSCCRAVHSNSCVLREHLLLTGGTQYYSGSRKTNAAARADAVRGSFQAAASLNEEAESGDEASAPPEPPRRRGRPPKQDKNRSAVKQKGSRAAKDSSRRRRGAQDTLDVSVDDAHEVEQINLPRISIAAMQQQEERSSNGSHRGGGTAAVGVAPRPQRPEDVEVKQRPVESVPEGPWRPFARFKKDRRDEVAQQPTPEERDALLNGEWIRHFYLFPQAEPERVAASGTWAEGEEEPYAFVYHAQPGRTGAIFLTSDFPMHSAVFSMLERQFFVVNQVDTVEGVDSTRATSLLKAKGHPELRIAFHALQDIVAYDTNMMKQQRTPGTVSVYQAPRSAYSCNGEPFLYVRWFRFNENRTLSAFLLSNGAVQVFVNNEYELRWFDESRKFLIRYNGVCELVDDGTFALAPGINHLLYDSFDA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]



GOL_A_4(5O2C)
WNK3_HUMAN
[Raw transfer]



EDO_A_7(2JFL)
SLK_HUMAN
[Raw transfer]
40 HHSearch 65.1124% -29 - C1 -2BDW - KCC2D_CAEEL -
21 HHSearch 64.7824% -25 - C1 -2Y7J - PHKG2_HUMAN -
37 HHSearch 62.8029% -42 * C1 *5K00 - MELK_HUMAN -
24 HHSearch 61.8025% -36 - C1 -4NIF - KS6A1_HUMAN -
32 HHSearch 61.4024% -45 - C1 -2QR8 - -
41 HHSearch 60.9725% 0 - C- -2WEL - KCC2D_HUMAN -
33 HHSearch 60.9425% 2 - C1 -2PHK - PHKG1_RABIT -
48 Fugue 60.9118% 1 - C1 -1KOB - ? -
34 HHSearch 60.2321% -20 - C1 -2X0G - DAPK1_HUMAN -
22 HHSearch 60.0824% -10 - C1 -2Y7J - PHKG2_HUMAN -
39 HHSearch 57.4920% -20 - C1 -4B4L - DAPK1_HUMAN -
51 Fugue 57.1414% 22 - C1 -2PZI - PKNG_MYCTU -
49 Fugue 55.1617% 5 - C1 -4XHG - ? -
42 HHSearch 55.0022% 0 - C- -3EB0 - ? -
30 HHSearch 54.6522% -6 - C1 -5O2C 2.6 WNK3_HUMAN
47 Fugue 54.2218% -11 - C1 -1TKI - TITIN_HUMAN -
31 HHSearch 54.1624% 0 - C- -3UC3 - SRK2I_ARATH -
23 HHSearch 53.9920% -27 - C1 -1TKI - TITIN_HUMAN -
29 HHSearch 53.3622% -1 - C1 -2X4F - MYLK4_HUMAN -
36 HHSearch 52.7923% -3 - C1 -4JS8 - -
12 PsiBlast_PDB 40.7531% -15 - C1 -2JFL 3.3 SLK_HUMAN