@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_36_0600: (2018-03-13 )
MSSFGRATARSGDAGTRDSLDRYNRLDVLGEGTYGVVYRAVDKITGQYVALKKVRLDRTEEGIPQTALREVSILQEFDHPNIVNLLDVICSDGKLYLVFEYVEADLKKAIEKQEGGYSGMDLKRLIYQLLDGLYFCHRHRIIHRDLKPANILLTSGNVLKLADFGLARAFQVPMHTYTHEVVTLWYRAPEILLGEKHYTPAVDMWSVGCIFAELARRKVLFRGDSEIGQLFEIFQVLGTPTDTEGSWPGVSRLPDYRDVFPKWTAKRLGQVLPELHPDAIDLLSKMLKYDPRERISAKEALQHPWFSDLRW

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_9(3QHW)
CDK2_HUMAN
[Raw transfer]



X63_A_3(3QX2)
CDK2_HUMAN
[Raw transfer]



SU9_A_4(3PY0)
CDK2_HUMAN
[Raw transfer]



X6A_A_3(3QWJ)
CDK2_HUMAN
[Raw transfer]



X11_A_3(3QQJ)
CDK2_HUMAN
[Raw transfer]



JWS_A_2(3PXY)
CDK2_HUMAN
[Raw transfer]



X0A_A_6(3QQH)
CDK2_HUMAN
[Raw transfer]



1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]



X01_A_3(3QL8)
CDK2_HUMAN
[Raw transfer]



38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]



X03_A_2(3QQL)
CDK2_HUMAN
[Raw transfer]



X14_A_4(3QRT)
CDK2_HUMAN
[Raw transfer]



X06_A_3(3QQG)
CDK2_HUMAN
[Raw transfer]



X62_A_6(3QWK)
CDK2_HUMAN
[Raw transfer]



X07_A_3(3QQF)
CDK2_HUMAN
[Raw transfer]



AMP_A_2(3GC0)
?
[Raw transfer]



X4B_A_4(3QX4)
CDK2_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



X65_A_3(3QXO)
CDK2_HUMAN
[Raw transfer]



X19_A_3(3QRU)
CDK2_HUMAN
[Raw transfer]



Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]



RRC_A_5(1UNL)
CDK5_HUMAN
[Raw transfer]



2AN_A_5(3PXQ)
CDK2_HUMAN
[Raw transfer]



2AN_A_3(3PXZ)
CDK2_HUMAN
[Raw transfer]



2AN_A_8(3PXF)
CDK2_HUMAN
[Raw transfer]



2AN_A_5(3PY1)
CDK2_HUMAN
[Raw transfer]



MPD_A_4(4YC3)
CDK1_HUMAN
[Raw transfer]



EDO_A_3(3QWK)
CDK2_HUMAN
[Raw transfer]



EDO_A_3(4AAA)
CDKL2_HUMAN
[Raw transfer]
34 HHSearch 91.7951%-127 - C1 -1V0B - CDC2H_PLAFK -
23 HHSearch 88.5258% -62 - C1 -4EK4 4.6 CDK2_HUMAN
3 PsiBlast_PDB 87.0257% -58 - C1 -3PXR - CDK2_HUMAN -
12 PsiBlast_PDB 86.2457% -61 - C1 -3QQJ 5.4 CDK2_HUMAN
30 HHSearch 84.9558% -55 - C1 -3QHW 7.0 CDK2_HUMAN
6 PsiBlast_PDB 84.8357% -59 - C1 -3PY0 5.5 CDK2_HUMAN
9 PsiBlast_PDB 84.7157% -58 - C1 -3QQF 4.4 CDK2_HUMAN
1 PsiBlast_PDB 84.6857% -48 - C1 -3PXF 6.5 CDK2_HUMAN
10 PsiBlast_PDB 84.6557% -56 - C1 -3QQG 5.7 CDK2_HUMAN
18 PsiBlast_PDB 84.3157% -57 - C1 -3QX2 4.8 CDK2_HUMAN
11 PsiBlast_PDB 84.1957% -57 - C1 -3QQH 7.1 CDK2_HUMAN
20 PsiBlast_PDB 84.1557% -55 - C1 -3QXO 4.4 CDK2_HUMAN
4 PsiBlast_PDB 83.8157% -55 - C1 -3PXY 5.4 CDK2_HUMAN
5 PsiBlast_PDB 83.7857% -50 - C1 -3PXZ 6.8 CDK2_HUMAN
13 PsiBlast_PDB 83.2957% -52 - C1 -3QQL 5.0 CDK2_HUMAN
15 PsiBlast_PDB 82.6957% -52 - C1 -3QRU 5.5 CDK2_HUMAN
19 PsiBlast_PDB 82.6157% -59 - C1 -3QX4 4.8 CDK2_HUMAN
14 PsiBlast_PDB 82.5057% -51 - C1 -3QRT 6.0 CDK2_HUMAN
8 PsiBlast_PDB 82.1957% -57 - C1 -3QL8 5.5 CDK2_HUMAN
16 PsiBlast_PDB 82.1757% -54 - C1 -3QWJ 5.0 CDK2_HUMAN
17 PsiBlast_PDB 80.8057% -53 - C1 -3QWK 5.7 CDK2_HUMAN
2 PsiBlast_PDB 80.8057% -48 - C1 -3PXQ 6.3 CDK2_HUMAN
7 PsiBlast_PDB 80.4757% -51 - C1 -3PY1 6.2 CDK2_HUMAN
36 HHSearch 79.9853% -74 - C1 -3GC0 4.0 ?
27 HHSearch 74.5749% -94 - C1 -1UNL 6.7 CDK5_HUMAN
22 HHSearch 72.2254% -15 * C1 *4YC3 2.9 CDK1_HUMAN
38 HHSearch 72.0749% -88 - C1 -4AU8 5.1 CDK5_HUMAN
41 HHSearch 70.7837%-120 - C1 -4AAA 2.2 CDKL2_HUMAN
33 HHSearch 63.1540% -94 - C1 -4BGQ 8.0 CDKL5_HUMAN
29 HHSearch 59.9137% -13 - C1 -5BYZ 2.5 MK07_HUMAN