@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CRK1: (2018-07-12 )
MTSRYERQEKIGEGTYGVVYKARDTSTAATVALKRIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHRLTIVFEYLDLDLKKYLDRENGNLDAATVQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISREKELKLGDFGLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEMATGTPLFAGKNDADQLMRIFRFLGTPNNRVWPSMNQYPNSNNMLSQPEFLQNFEPEWSNVLGSVPGYEKLGCAGVDLLEKLLRYEPSERITAADALNHPYFSLQF

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

404_A_2(3PJ8)
CDK2_HUMAN
[Raw transfer]




6QB_A_2(5K4J)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(3NIZ)
?
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




919_B_6(5G6V)
CDK16_HUMAN
[Raw transfer]




ADP_A_9(3QHW)
CDK2_HUMAN
[Raw transfer]




INR_A_3(1V0O)
CDC2H_PLAFK
[Raw transfer]




PVB_A_3(1V0P)
CDC2H_PLAFK
[Raw transfer]




ATP_E_5(1FIN)
CDK2_HUMAN
[Raw transfer]




919_A_3(5G6V)
CDK16_HUMAN
[Raw transfer]




AMP_A_2(3GC0)
?
[Raw transfer]




RRC_A_5(1UNL)
CDK5_HUMAN
[Raw transfer]




RRC_A_5(1UNL)
CDK5_HUMAN
[Raw transfer]




LZ9_A_4(4Y72)
CDK1_HUMAN
[Raw transfer]




1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]




ALH_A_5(1UNG)
CDK5_HUMAN
[Raw transfer]




LZ9_A_4(5HQ0)
CDK1_HUMAN
[Raw transfer]




4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




MPD_A_4(4YC3)
CDK1_HUMAN
[Raw transfer]




DMS_A_7(5VCY)
PMYT1_HUMAN
[Raw transfer]




28 HHSearch 94.8758%-114 - C1 -1V0B - CDC2H_PLAFK -
3 PsiBlast_PDB 93.9957%-104 - C1 -1V0P 8.3 CDC2H_PLAFK
4 PsiBlast_PDB 93.4157% -96 - C1 -1V0B - CDC2H_PLAFK -
6 PsiBlast_PDB 87.8356% -98 - C1 -3NIZ 4.3 ?
1 PsiBlast_PDB 87.4757% -91 - C1 -1V0O 6.0 CDC2H_PLAFK
11 PsiBlast_PDB 84.4055% -80 - C1 -1UNL 7.3 CDK5_HUMAN
12 PsiBlast_PDB 84.2155% -80 - C1 -3O0G - CDK5_HUMAN -
9 PsiBlast_PDB 83.8355% -84 - C1 -1UNG 5.2 CDK5_HUMAN
35 HHSearch 83.7154% -42 * C1 *3QHW 7.0 CDK2_HUMAN
8 PsiBlast_PDB 83.3355% -89 - C1 -1H4L - CDK5_HUMAN -
10 PsiBlast_PDB 82.9955% -89 - C1 -1UNH - CDK5_HUMAN -
29 HHSearch 82.7056% -81 - C1 -1UNL 7.3 CDK5_HUMAN
33 HHSearch 81.0552%-115 - C1 -5G6V 12.0 CDK16_HUMAN
32 HHSearch 80.9952%-101 - C1 -5G6V 11.1 CDK16_HUMAN
20 PsiBlast_PDB 80.9053% -49 - C1 -1FIN 3.6 CDK2_HUMAN
19 PsiBlast_PDB 80.7653% -53 - C1 -3PJ8 6.4 CDK2_HUMAN
7 PsiBlast_PDB 80.6655% -71 - C1 -4AU8 4.8 CDK5_HUMAN
5 PsiBlast_PDB 80.6256%-111 - C1 -2QKR - ? -
34 HHSearch 80.4354% -51 - C1 -4EK4 4.6 CDK2_HUMAN
31 HHSearch 79.0656% -71 - C1 -4AU8 4.8 CDK5_HUMAN
18 PsiBlast_PDB 78.8953% -49 - C1 -5K4J 6.8 CDK2_HUMAN
15 PsiBlast_PDB 76.5255% -15 - C1 -5HQ0 7.0 CDK1_HUMAN
14 PsiBlast_PDB 76.5255% -15 - C1 -4Y72 7.0 CDK1_HUMAN
17 PsiBlast_PDB 74.9055% -15 - C1 -4YC3 2.8 CDK1_HUMAN
38 HHSearch 71.7452% -47 - C1 -3GC0 3.8 ?
37 HHSearch 69.6536%-109 - C1 -4BGQ 7.8 CDKL5_HUMAN
27 HHSearch 58.1036% 1 - C1 -5BYZ 9.0 MK07_HUMAN