@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_10_0200: (2018-07-12 )
MQAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKLEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHFDESVTDVWDMHKIFTAEVERFNDLRERREEVARERAMAAQQQGEQVLGTDHMPRTHSLMELAGNAPAPS

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

E63_A_2(4FV8)
MK01_HUMAN
[Raw transfer]




ATP_A_3(4GT3)
MK01_RAT
[Raw transfer]




EK5_A_2(4FV2)
MK01_HUMAN
[Raw transfer]




EK6_A_2(4FV3)
MK01_HUMAN
[Raw transfer]




EK9_A_2(4FV5)
MK01_HUMAN
[Raw transfer]




EK4_A_2(4FV1)
MK01_HUMAN
[Raw transfer]




E28_A_2(4G6O)
MK01_HUMAN
[Raw transfer]




E94_A_2(4FV7)
MK01_HUMAN
[Raw transfer]




ADP_A_2(4GVA)
MK01_RAT
[Raw transfer]




6TT_A_6(5LCK)
MK01_HUMAN
[Raw transfer]




E71_A_2(4FV9)
MK01_HUMAN
[Raw transfer]




6PB_A_2(3QYW)
MK01_RAT
[Raw transfer]




CQ8_A_3(4ZZN)
MK01_HUMAN
[Raw transfer]




Z8B_A_2(3QYZ)
MK01_RAT
[Raw transfer]




GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]




CQ6_A_3(4ZZM)
MK01_HUMAN
[Raw transfer]




TT4_A_2(4XP2)
MK01_RAT
[Raw transfer]




620_A_2(4XOZ)
MK01_RAT
[Raw transfer]




DX4_A_2(4XP3)
MK01_RAT
[Raw transfer]




E75_A_2(4FUX)
MK01_HUMAN
[Raw transfer]




EK0_A_2(4G6N)
MK01_HUMAN
[Raw transfer]




DMS_A_5(4XP3)
MK01_RAT
[Raw transfer]




EDO_A_8(4FV1)
MK01_HUMAN
[Raw transfer]




EDO_A_6(4FV3)
MK01_HUMAN
[Raw transfer]




21 HHSearch 80.0099% - - C- -3PG1 - ? -
1 PsiBlast_PDB 80.0099% - - C- -3PG1 - ? -
11 PsiBlast_PDB 71.8140% -48 - C1 -4FV9 9.0 MK01_HUMAN
10 PsiBlast_PDB 70.0340% -47 - C1 -4FV8 8.3 MK01_HUMAN
9 PsiBlast_PDB 69.7540% -49 - C1 -4FV5 9.5 MK01_HUMAN
8 PsiBlast_PDB 69.1940% -38 - C1 -4FV3 7.1 MK01_HUMAN
2 PsiBlast_PDB 68.5440% -36 - C1 -5LCK 6.0 MK01_HUMAN
18 PsiBlast_PDB 67.6640% -31 - C1 -4GVA 5.2 MK01_RAT
17 PsiBlast_PDB 67.5640% -36 - C1 -4GT3 7.0 MK01_RAT
19 PsiBlast_PDB 67.4840% -33 - C1 -4XOZ 6.2 MK01_RAT
12 PsiBlast_PDB 66.7540% -32 - C1 -4G6N 5.4 MK01_HUMAN
7 PsiBlast_PDB 66.3840% -29 - C1 -4FV2 6.5 MK01_HUMAN
20 PsiBlast_PDB 66.1440% -31 - C1 -4ZZM 5.3 MK01_HUMAN
14 PsiBlast_PDB 65.5540% -34 - C1 -4XP3 6.0 MK01_RAT
13 PsiBlast_PDB 65.4040% -33 - C1 -4XP2 4.8 MK01_RAT
5 PsiBlast_PDB 65.1040% -33 - C1 -4FUX 7.2 MK01_HUMAN
3 PsiBlast_PDB 65.0340% -33 - C1 -4FV7 10.3 MK01_HUMAN
15 PsiBlast_PDB 64.6140% -30 - C1 -3QYW 5.9 MK01_RAT
16 PsiBlast_PDB 64.2540% -25 - C1 -3QYZ 5.4 MK01_RAT
4 PsiBlast_PDB 64.1740% -33 - C1 -4G6O 6.5 MK01_HUMAN
6 PsiBlast_PDB 64.0140% -31 - C1 -4FV1 7.8 MK01_HUMAN
22 HHSearch 61.8538% -38 - C1 -5BYZ 2.7 MK07_HUMAN
25 HHSearch 61.2344% -35 - C1 -4ZZN 6.4 MK01_HUMAN