@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_14_0020: (2018-07-12 )
MSLRVRLRVPKQWDRFQVNIDEELQQEELSRTLTEREIDDFNRRNLHSVSELSDHLRLLVFGSDECVTCSEDICAAVEYIVGPQRRWNSSCDEVCEFRRAISRAYLNEWKAFQSVHPSVPERLATRSLPQVFSVPPLQKAQMDLLMQMCPRNAETGDGSISMRLWYLDSAGSRCSTRRRFPFDTAADDAIRLTMSSAREFASMREKTDDTPLIFVFRVKGRNEYIYGSQPLINYRYIRHCVSKRAEIDLVVEPKEATLFAVPLFRPSYPSRTLASPSDADASKSSTSEICLWDLTSKLSIRIVGGFEKLAISASRMKDENVRDSSSLYFAVLVEAYVGTWRCCEPQITDWQLCENAKNSHSLAARVYWKDGGTVTFSIDLSNVPRELKLCFTLVASSTDRIVGARAATAEEVIAAVEVNTKKTDDQGHSVFFLGTAATQLFDYAAKMRMGMWRIYLWEGKTRANPIGLNSINPDSNACTFEVEFPCFDKPVFFPSGRPPKRKEEDARRNFADREAALSSYLINNEVEQLRQLKRVLMYDPLVHLSSDDKTILWKYREMLLGQPKAMAKVMSAVNWLMPFDVYEAHCLLRRWSPLAAFDALELLDAHYADLAVREQAVEYIDKMSDYELRGCILQLVQVLKYEPYHYSALARFLLRRSLRSNHIIGHYVFWYLAAEVKNLTICERHGLLLEELIKRSPHRLDYVRQVYVCNELLKCALRVQRAPKKDRVKCLRASLAKVRFPHRFTLALNPSVECCAVDIDECKVMESKKFPLWLAFRNHLDQDEHFFIIFKSGDDLRQDLLTLQLLEFMDSLWKASGLDLHLIPYGCISTGEGVGMIEVVLNSDTIANITRREGGAQAAFNVDPIINWLRQFNHDRGEVERCLWNFVLSVAGYTVATYVLGIGDRHNDNIMLRQDGTLFHIDFGHFLGNFKTKFGIKRETAPFIFTPMYLYAMGGSSSPIFKYFVDVACRAYNALRRHSSALMMLFMLMLSTGIPELQTLEDIEWLRTVLLLNRTDEEASDHYKGLINDALGNFRTLLNDYIHIMVH

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(1E8X)
PK3CG_PIG
[Raw transfer]



X6K_A_5(2X6K)
?
[Raw transfer]



GD9_A_3(2Y3A)
PK3CB_MOUSE
[Raw transfer]



9EM_A_3(5VLR)
PK3CD_HUMAN
[Raw transfer]
3 PsiBlast_PDB 80.5933% - - C3 -4OVU - PK3CA_HUMAN -
50 Fugue 75.2833% -28 - C3 -4TUU - PK3CA_HUMAN -
51 Fugue 72.6831% -44 - C3 -1E8X 4.8 PK3CG_PIG
5 PsiBlast_PDB 72.4633% -38 - C3 -5SWP - PK3CA_HUMAN -
9 PsiBlast_PDB 72.3533% -39 - C3 -5SXC - PK3CA_HUMAN -
16 PsiBlast_PDB 72.3133% -44 - C3 -5SX8 - PK3CA_HUMAN -
6 PsiBlast_PDB 72.3033% -40 - C3 -5SWR - PK3CA_HUMAN -
10 PsiBlast_PDB 72.2933% -39 - C3 -5SXD - PK3CA_HUMAN -
8 PsiBlast_PDB 72.1133% -35 - C3 -5SXB - PK3CA_HUMAN -
18 PsiBlast_PDB 72.0433% -41 - C3 -5SXK - PK3CA_HUMAN -
11 PsiBlast_PDB 71.6333% -35 - C3 -5SXE - PK3CA_HUMAN -
12 PsiBlast_PDB 71.4733% -30 - C3 -5SXI - PK3CA_HUMAN -
22 HHSearch 71.1631% -20 * C3 *5VLR 8.5 PK3CD_HUMAN
15 PsiBlast_PDB 71.0933% -39 - C3 -5SWO - PK3CA_HUMAN -
20 PsiBlast_PDB 71.0133% -34 - C3 -4L23 - PK3CA_HUMAN -
7 PsiBlast_PDB 70.7233% -34 - C3 -5SWT - PK3CA_HUMAN -
14 PsiBlast_PDB 70.0333% -15 - C3 -5SWG - PK3CA_HUMAN -
17 PsiBlast_PDB 69.1333% -21 - C3 -5SXF - PK3CA_HUMAN -
4 PsiBlast_PDB 69.0033% -17 - C3 -4OVV - PK3CA_HUMAN -
13 PsiBlast_PDB 68.4333% -15 - C3 -5SW8 - PK3CA_HUMAN -
1 PsiBlast_PDB 67.0933% -15 - C3 -2Y3A 6.6 PK3CB_MOUSE
30 HHSearch 54.0131% -14 - C3 -2X6K 5.7 ?