@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_16_0310: (2018-07-13 )
MMKPSALDRIHVREDDPKELFEIVESVGIGNFGVVLKARNRATDDIVAIKQVPLSDTDKEDLDTIVKEVEILQECDHPNIVRFYGTYHSMGVLWIVMEYCEGGSVDTAYDLLRRPLSEPLIAYVCRQTLLGLRYLHERHVIHRDIKGSNLLLTKNGQVKLADFGVSTELKHTLSRRNSFIGTALWMAPEALTEKDYDSRADMWSLGITTIELAEGQPPYLGMHIARAVFFIPLNDPPTLQAKERWSPQMNMFIRRLLTKDKELRPSAATMLMDPFVDPSAVASQEEMAAVVEQLLTRRRSMDERRDGNNKGSNTSAMTIVTRTSSVVGAIEGAGEEEGEGVAAIPTDEAAAQWIDEHVAPQRRASPAAGRVVARGGGGAVAAGAAAGDRGAPLGGRLMLLPLLHLEDMSFDALNGGGRTLFCGSTAGVSGCAGTVGGATLSSGGAANGAAGGGPRVGGPGAAQAALDGAYTGDGNGSTTMMASVNRYCHPSHLLPTSGGGGVTPMVSAFPPVYGPPSHEARMAAAAAHGDALAESLHLLGYSAEGVSPLYLRCFETTTLNTVREVFLYNQYLPYTRAVSEAEAKHAQRMKLLCGTVLKNVYAATCESTRNA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(6AO5)
STK3_HUMAN
[Raw transfer]




GVD_A_9(2UV2)
SLK_HUMAN
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




B6E_B_9(6EIM)
STK10_HUMAN
[Raw transfer]




5BS_A_3(5DH3)
STK3_HUMAN
[Raw transfer]




6UI_A_3(4USF)
SLK_HUMAN
[Raw transfer]




6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]




B6E_A_7(6EIM)
STK10_HUMAN
[Raw transfer]




6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]




G6I_A_3(4EQU)
STK10_HUMAN
[Raw transfer]




274_A_10(2J7T)
STK10_HUMAN
[Raw transfer]




DKI_A_2(2JFL)
SLK_HUMAN
[Raw transfer]




DKI_A_13(2J51)
SLK_HUMAN
[Raw transfer]




GOL_A_3(5O2C)
WNK3_HUMAN
[Raw transfer]




38O_A_3(5OWQ)
STK10_HUMAN
[Raw transfer]




R09_A_3(4USE)
STK10_HUMAN
[Raw transfer]




XZN_A_2(4BC6)
STK10_HUMAN
[Raw transfer]




XZN_A_2(4BC6)
STK10_HUMAN
[Raw transfer]




EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]




2 PsiBlast_PDB 85.5643%-104 - C1 -5DH3 6.6 STK3_HUMAN
1 PsiBlast_PDB 80.5848%-117 - C1 -3COM - STK4_HUMAN -
3 PsiBlast_PDB 79.3646%-117 - C1 -4LGD - STK3_HUMAN -
42 HHSearch 79.2645% -90 - C1 -6EIM 10.7 STK10_HUMAN
18 PsiBlast_PDB 76.4744% -33 - C1 -3ZHP - STK24_HUMAN -
35 HHSearch 75.6446% -82 - C1 -4BC6 6.7 STK10_HUMAN
28 HHSearch 75.5146% -71 - C1 -5J5T 6.3 M4K3_HUMAN
5 PsiBlast_PDB 75.4245% -19 - C1 -5AJQ - STK10_HUMAN -
8 PsiBlast_PDB 74.8945% -29 - C1 -4AOT - STK10_HUMAN -
14 PsiBlast_PDB 72.8045% -73 - C1 -5J5T 6.3 M4K3_HUMAN
23 HHSearch 71.2137%-107 - C1 -4XBR - INKA1_HUMAN (first) -
4 PsiBlast_PDB 70.4146%-128 - C1 -6AO5 4.6 STK3_HUMAN
6 PsiBlast_PDB 70.3845% -13 - C1 -4BC6 6.7 STK10_HUMAN
13 PsiBlast_PDB 69.3245% -8 - C1 -6EIM 10.9 STK10_HUMAN
16 PsiBlast_PDB 68.4644% -1 - C1 -4USF 7.3 SLK_HUMAN
12 PsiBlast_PDB 68.2545% -10 - C1 -5OWR - STK10_HUMAN -
10 PsiBlast_PDB 68.1245% -9 - C1 -4USE 7.0 STK10_HUMAN
19 PsiBlast_PDB 67.1143% 11 - C1 -2JFL 5.9 SLK_HUMAN
15 PsiBlast_PDB 66.5344% 11 - C1 -2J51 4.8 SLK_HUMAN
7 PsiBlast_PDB 66.4745% -13 - C1 -2J7T 8.5 STK10_HUMAN
20 PsiBlast_PDB 66.2244% 12 - C1 -2UV2 4.4 SLK_HUMAN
9 PsiBlast_PDB 65.0545% -22 - C1 -4EQU 11.3 STK10_HUMAN
11 PsiBlast_PDB 59.0045% -26 - C1 -5OWQ 5.7 STK10_HUMAN