@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_25_1640: (2018-07-13 )
MASVSEKYQPTGKEVPFGGGRFLLSHRLGNGSFGDIFEGYDKKSHRIVAVKLERKKARYPQLSYESKVYRVLHQPPVGQNEVNPKQLFAEGSNHSVVNGGTAQGDSNNTPSNLPQSVNATAQQQRKSLEISIVVGIPQIYYFDSEGDYNIMVMEMCGPSLEDVFNYCHRRFSLKTVLMIADQLLHRIQYFHEKGFVHRDIKPENFVFGCRSKAHILYIIDYGLSKLYWEVKKNSHIPFAEGRPLTGTARYCSTNVHRGFEQSRRDDLESIGFLLIYFLRGNLPWQGIQAKDQQIKTIKIGETKIATPLEELCKGMPKEFLNYCQYCRSLSFTQKPDYDSLRRLFRDLGKRLGLTLPARDLPSGNFCAANRTGAKPSNPLAVPAMLSTDITSPTDSRLLSVVSESTVNSRRSHPFQTPSTVAAQVLPTLEDVDPMRGPYDWCFDWFCKRQMEVKRGMEEQSRQQRLETQMSAIASRNSELRLEDVSDVMNGSTQRDKNSAFGSKRPMFSSPLQPDRLRM

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1QN_A_5(4KB8)
KC1D_HUMAN
[Raw transfer]




0CK_A_5(3UYT)
KC1D_HUMAN
[Raw transfer]




PFO_A_3(4TN6)
KC1D_HUMAN
[Raw transfer]




1QM_A_5(4KBA)
KC1D_HUMAN
[Raw transfer]




0CK_A_3(3UZP)
KC1D_HUMAN
[Raw transfer]




GOL_B_8(5X18)
KC11_YEAST
[Raw transfer]




9WG_A_5(5W4W)
KC1D_HUMAN
[Raw transfer]




1QG_A_5(4KBK)
KC1D_HUMAN
[Raw transfer]




15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]




1QJ_A_3(4KBC)
KC1D_HUMAN
[Raw transfer]




BRK_A_2(2IZR)
KC1G3_HUMAN
[Raw transfer]




AUE_A_3(5IH5)
KC1D_HUMAN
[Raw transfer]




37J_A_9(4TWC)
KC1D_HUMAN
[Raw transfer]




16W_A_3(4HNF)
KC1D_HUMAN
[Raw transfer]




AUG_A_6(5IH6)
KC1D_HUMAN
[Raw transfer]




386_A_12(4TW9)
KC1D_HUMAN
[Raw transfer]




37J_A_9(4TWC)
KC1D_HUMAN
[Raw transfer]




37J_B_18(4TWC)
KC1D_HUMAN
[Raw transfer]




ADP_A_2(4XHG)
?
[Raw transfer]




26 HHSearch 92.5854% -99 - C1 -3SV0 - ? -
45 Fugue 91.8343% -86 - C1 -4XHG 3.2 ?
25 HHSearch 90.7452%-111 - C1 -5FQD - KC1A_HUMAN -
1 PsiBlast_PDB 90.4441% -99 - C1 -3SV0 - ? -
24 HHSearch 88.5654% -94 - C1 -4TWC 7.0 KC1D_HUMAN
23 HHSearch 88.2254% -98 - C1 -4TWC 7.3 KC1D_HUMAN
4 PsiBlast_PDB 87.5144%-101 - C1 -4TN6 7.8 KC1D_HUMAN
18 PsiBlast_PDB 87.1244% -92 - C1 -1CKJ - KC1D_RAT -
17 PsiBlast_PDB 87.0544% -94 - C1 -5W4W 6.8 KC1D_HUMAN
19 PsiBlast_PDB 86.7644% -96 - C1 -1CKI - KC1D_RAT -
8 PsiBlast_PDB 86.1444% -97 - C1 -4HNF 6.3 KC1D_HUMAN
2 PsiBlast_PDB 85.9344%-100 - C1 -4TW9 5.9 KC1D_HUMAN
5 PsiBlast_PDB 85.8144%-103 - C1 -3UYS - KC1D_HUMAN -
7 PsiBlast_PDB 85.7144% -91 - C1 -3UZP 7.5 KC1D_HUMAN
6 PsiBlast_PDB 85.4444% -93 - C1 -3UYT 7.2 KC1D_HUMAN
10 PsiBlast_PDB 85.2744% -98 - C1 -5IH4 - KC1D_HUMAN -
20 PsiBlast_PDB 85.1544% -95 - C1 -4KBC 6.1 KC1D_HUMAN
9 PsiBlast_PDB 85.0244%-102 - C1 -4HGT 6.1 KC1D_HUMAN
13 PsiBlast_PDB 84.8244% -95 - C1 -5MQV - KC1D_HUMAN -
12 PsiBlast_PDB 84.6844% -98 - C1 -5IH6 5.2 KC1D_HUMAN
11 PsiBlast_PDB 84.4944% -99 - C1 -5IH5 5.0 KC1D_HUMAN
3 PsiBlast_PDB 84.3544% -95 - C1 -4TWC 7.3 KC1D_HUMAN
16 PsiBlast_PDB 84.2044%-101 - C1 -4KBK 6.4 KC1D_HUMAN
14 PsiBlast_PDB 81.2544%-106 - C1 -4KB8 6.7 KC1D_HUMAN
27 HHSearch 79.0444% -50 - C1 -5X18 2.4 KC11_YEAST
15 PsiBlast_PDB 78.6144%-102 - C1 -4KBA 6.7 KC1D_HUMAN
22 HHSearch 76.7849% -49 - C1 -2IZR 4.2 KC1G3_HUMAN