@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_28_1800: (2018-07-13 )
MFYSLFRRPYTARSVPATLGCHASGESGTTAAPAGANDSRNGNAGPSPLTPSGAAATNAPPHPNGSAASPVAQGGDRRVFEGEERLLGHLHAPRQYPLDPEKDADALVLLAQQYSITSVVITHYRVKESYVEYVIECVRGHDAWRVYRRYQQFKALDHDLKQICSSRHGSSHGAYGVVPVLPGSHWMDVTNQSPELVEQRRRYLEIYLQQLLVPRNLFYVARTQLYDFLHDGEVPTHLKLTGIQPLLGLISTHTDLVNDEDDDDAVLRELQETQSRQQKQYLRAAERAATVVSGIAADAALPLLRASGSFPAVPTDCASHAGAAAAASSPVAPGSGRVEAGSLEATAATTRTTSSMPSSAATFATNREPSKTLATRGVCTGTQTTGTAVVDEAGDDGEANGAEGRSDCVDNTSKMRLTTKSAHSRVGGAAFTAADPMQAGFSDERLPPASANCAQCNAEFTSFLYPRRCFFCLVQFCSACLQQLPVLESASSPGRALATTTGRSDPVHFLVQETTPLSTHAKAAGSTVPACLQCAENYSRRLDRCSTAPGGGAYRGMQSTLNTLAQQGPPAPSGRPSQSSPVVGLSPATSTRSCVGEERSPVIVHQRVTNPASPIPHPSLSSPGGALPGRSGTPSPVGFQDFQLLTVIGRGTFGKVLKVQMRATHKVYAMKIMNKATVYRRCMTSYMKEEKAILTSLQPSPYIVRCHYAFQTEYYLVFVLDYLPGGELYDYIYPKLCLSPEAACIYAAELVLALECLHRQDVVHRDLKPENVVLTADGHICLTDFGLARRAFSRSRRRSFVGSPEYVAPETIQGQVQTAAVDWWSFGVMLYEMLAGRTPFHARNNNTVYDNVLHKELALPVLRADNGTGAAAASASQPGVAKGAPTFRGFSPEAVSLLTGLLARDPSTRLQDASAIKRHPFFHGLNWEDLRRRRVPAPCIPGDMRDNDVRHFKREFVSEWASVPPLTNMTRASIEALTKCFDNFPLSRTAAPAGFALVGNANTMPTSSATATTSLASHSLQQVHGDTCTSSLSLTLPPSEHATDDQRLREPVRFFHSMAEAQRSFHGTWHVVSIEVHAVDDGRVIFPWGGDVSGVLVYTTGGRFSLQLTSSARRPVGPVQRVTQLSKEDLCDTYCSYVASFGRFHLFPSSTDDGCGVVRHFSEGNLCPNLMLANTVFQYRMHTEPLHPSATNGESEYKGSGKHADTASSTAAAVTWARRSSTTDAQDGSGGGASGNRGRVGEGGSLGGSEDEEGEAGRGSNRIAIVGDAGHRHGRDAAAATTQPPPSPPPLERRIMLRLSTRPQRALEQDFLAFTSLVFEKVS

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




ANP_A_2(3G51)
KS6A3_MOUSE
[Raw transfer]




ACP_A_2(5LI9)
KPCI_HUMAN
[Raw transfer]




MMG_A_2(3HDM)
SGK1_HUMAN
[Raw transfer]




GMG_A_2(3HDN)
SGK1_HUMAN
[Raw transfer]




584_A_3(5D9K)
KS6A3_HUMAN
[Raw transfer]




583_A_2(5D9L)
KS6A3_HUMAN
[Raw transfer]




2NK_A_2(4NUS)
KS6A3_HUMAN
[Raw transfer]




ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]




2NS_A_2(4NW6)
KS6A3_HUMAN
[Raw transfer]




AMP_A_6(4Y5Q)
?
[Raw transfer]




07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]




AQE_A_2(5OTE)
?
[Raw transfer]




2NR_A_2(4NW5)
KS6A3_HUMAN
[Raw transfer]




AFE_A_2(4EL9)
KS6A3_MOUSE
[Raw transfer]




SL0_A_2(3UBD)
KS6A3_MOUSE
[Raw transfer]




EDO_A_5(4AW2)
MRCKA_RAT
[Raw transfer]




EDO_A_5(4RA5)
KPCT_HUMAN
[Raw transfer]




EDO_A_6(4RA5)
KPCT_HUMAN
[Raw transfer]




37 HHSearch 76.7233% -92 - C1 -2I0E - KPCB_HUMAN -
36 HHSearch 74.8234% -90 - C1 -5LI9 7.1 KPCI_HUMAN
27 HHSearch 74.3734% -78 - C1 -4RA5 3.1 KPCT_HUMAN
39 HHSearch 71.2134% -81 - C1 -3A8X - KPCI_HUMAN -
33 HHSearch 70.7633%-103 * C1 *2I0E - KPCB_HUMAN -
28 HHSearch 70.7033%-114 - C1 -3TXO 6.7 KPCL_HUMAN
30 HHSearch 69.2133% -80 - C1 -5F9E - KPCT_HUMAN -
44 Fugue 68.6026% -1 - C1 -3C4Z - RK_BOVIN -
4 PsiBlast_PDB 68.4036%-113 - C1 -2R5T 6.9 SGK1_HUMAN
29 HHSearch 67.5938% 0 - C- -4GV1 - AKT1_HUMAN -
32 HHSearch 65.1333% -77 - C1 -4WOT - ROCK2_HUMAN -
45 Fugue 65.1135% -74 - C1 -5KCV - AKT1_HUMAN -
6 PsiBlast_PDB 64.6836%-118 - C1 -3HDN 6.9 SGK1_HUMAN
5 PsiBlast_PDB 64.6236%-109 - C1 -3HDM 6.7 SGK1_HUMAN
3 PsiBlast_PDB 64.4236% 0 - C- -3D0E - AKT2_HUMAN -
2 PsiBlast_PDB 64.4236% 0 - C- -3E87 - AKT2_HUMAN -
42 HHSearch 64.4034% -58 - C1 -5OTE 5.9 ?
14 PsiBlast_PDB 64.1635% -92 - C1 -3O96 - AKT1_HUMAN -
34 HHSearch 63.8536% -16 - C- -4OTD - PKN1_HUMAN -
40 HHSearch 63.5836% -73 - C1 -3V8S - ROCK1_HUMAN -
17 PsiBlast_PDB 59.7437% -21 - C1 -4NUS 7.8 KS6A3_HUMAN
49 Fugue 59.1331% -6 - C1 -4AW2 2.2 MRCKA_RAT
16 PsiBlast_PDB 58.2737% -29 - C1 -4NW6 7.7 KS6A3_HUMAN
15 PsiBlast_PDB 56.7537% -30 - C1 -4NW5 6.7 KS6A3_HUMAN
18 PsiBlast_PDB 50.5737% 7 - C1 -5D9L 4.9 KS6A3_HUMAN
13 PsiBlast_PDB 50.4337% -3 - C1 -5D9K 6.8 KS6A3_HUMAN
19 PsiBlast_PDB 48.2137% -45 - C1 -3UBD 7.8 KS6A3_MOUSE
20 PsiBlast_PDB 46.1237% -38 - C1 -4EL9 7.0 KS6A3_MOUSE
10 PsiBlast_PDB 41.6037% -6 - C1 -3G51 6.5 KS6A3_MOUSE