@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_30_0850: (2018-07-13 )
MSGYLKVLSPDGRWETRYVEIDDAKLRIWRTKGDKESSAAVVKELDLKCATLREVSEPNTWAVQPEKAEATYFQADGEERKTEWMDTLRHYNSSSSASEKVTLRDFEKKFVLGKGSYGKVFMVVKKDTDKWYAMKEMSAEKMRQAEIKAPFAERIILEEIDHPFIVHLHYSFQEQGNLYMILDLLAGGELFTYIEQHAPLDEEVVKFYAAEVALALGYLHSRNIIYRDLKPENVVFDRDGHACLTDFGLAKANVHEPNAVTYCGTNEYLAPELLKGVPHGKAVDWWSLGLMMCEMLFNDLPFYDENPMQMQMKILTEDVAFPPHIQITEETKDLIRCLLNKNPERRLQTLEAFKAHKCFSNLDFGLLEARKLKAPITPDPNPAHNFAKEFTSEVIVQNESPSQAVVTLAGYTYDRDLSEQEKSPSHSPTIAEELRQRRASMKKSTNGSDAASPPVTGENRTSNSSPAGAPTKQAAAGPVKKVEHHIPAKVAPQAARKKLTGNKSFDKPTK

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4WB8)
KAPCA_HUMAN
[Raw transfer]




ANP_A_2(3G51)
KS6A3_MOUSE
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




ACP_A_3(2Z7Q)
KS6A1_HUMAN
[Raw transfer]




MMG_A_2(3HDM)
SGK1_HUMAN
[Raw transfer]




MMG_A_2(3HDM)
SGK1_HUMAN
[Raw transfer]




583_A_2(5D9L)
KS6A3_HUMAN
[Raw transfer]




GMG_A_2(3HDN)
SGK1_HUMAN
[Raw transfer]




STU_A_2(2Z7R)
KS6A1_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




STU_A_3(3A60)
KS6B1_HUMAN
[Raw transfer]




AQ5_A_5(5OTF)
?
[Raw transfer]




FS9_A_3(3WF7)
KS6B1_HUMAN
[Raw transfer]




5VS_A_3(5F9E)
KPCT_HUMAN
[Raw transfer]




STU_A_2(3A61)
KS6B1_HUMAN
[Raw transfer]




584_A_3(5D9K)
KS6A3_HUMAN
[Raw transfer]




AQE_A_2(5OTE)
?
[Raw transfer]




5FI_A_2(4L3J)
KS6B1_HUMAN
[Raw transfer]




P01_A_2(2Z7S)
KS6A1_HUMAN
[Raw transfer]




3L0_A_3(4RA5)
KPCT_HUMAN
[Raw transfer]




07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]




5FI_A_2(4L3L)
KS6B1_HUMAN
[Raw transfer]




5FI_A_3(3WE4)
KS6B1_HUMAN
[Raw transfer]




AFE_A_2(4EL9)
KS6A3_MOUSE
[Raw transfer]




SL0_A_2(3UBD)
KS6A3_MOUSE
[Raw transfer]




QCT_A_2(4GUE)
KS6A3_MOUSE
[Raw transfer]




41 HHSearch 73.1339% -43 - C1 -4WB8 9.0 KAPCA_HUMAN
40 HHSearch 73.1038% -44 - C1 -4WIH - KAPCA_CRIGR -
36 HHSearch 72.7040%-101 - C1 -2R5T 6.5 SGK1_HUMAN
37 HHSearch 70.5540% -96 - C1 -3HDM 6.7 SGK1_HUMAN
43 HHSearch 70.1938% -43 - C1 -1RDQ 8.0 KAPCA_MOUSE
24 HHSearch 69.3339% -9 * C1 *4GV1 7.2 AKT1_HUMAN
5 PsiBlast_PDB 68.4943% 0 - C- -4NUS - KS6A3_HUMAN -
4 PsiBlast_PDB 68.4943% 0 - C- -4NW6 - KS6A3_HUMAN -
3 PsiBlast_PDB 68.4943% 0 - C- -4NW5 - KS6A3_HUMAN -
13 PsiBlast_PDB 66.0840% -48 - C1 -2R5T 6.5 SGK1_HUMAN
30 HHSearch 65.9135% -16 - C1 -5LI9 - KPCI_HUMAN -
19 PsiBlast_PDB 65.5844% -8 - C1 -4L3L 7.9 KS6B1_HUMAN
39 HHSearch 65.3845% -11 - C1 -3WF7 8.2 KS6B1_HUMAN
34 HHSearch 64.9435% -14 - C1 -3A8X - KPCI_HUMAN -
32 HHSearch 63.8334% -49 - C1 -5OTE 5.6 ?
15 PsiBlast_PDB 63.5540% -49 - C1 -3HDN 6.8 SGK1_HUMAN
14 PsiBlast_PDB 63.5340% -45 - C1 -3HDM 6.7 SGK1_HUMAN
26 HHSearch 63.2933% -1 - C1 -5F9E 7.4 KPCT_HUMAN
18 PsiBlast_PDB 63.1344% -6 - C1 -4L3J 7.6 KS6B1_HUMAN
20 PsiBlast_PDB 62.8244% -11 - C1 -3WE4 3.0 KS6B1_HUMAN
21 HHSearch 61.5733% 2 - C1 -4RA5 4.9 KPCT_HUMAN
33 HHSearch 60.8934% -25 - C1 -5OTF 6.9 ?
2 PsiBlast_PDB 59.4642% 13 - C1 -5D9K 6.4 KS6A3_HUMAN
6 PsiBlast_PDB 58.7643% 17 - C1 -5D9L 5.2 KS6A3_HUMAN
23 HHSearch 57.2134% -15 - C1 -3TXO 6.4 KPCL_HUMAN
16 PsiBlast_PDB 54.5744% -15 - C1 -3A60 8.0 KS6B1_HUMAN
9 PsiBlast_PDB 54.5043% 9 - C1 -4GUE 7.5 KS6A3_MOUSE
1 PsiBlast_PDB 53.0642% 16 - C1 -3G51 7.4 KS6A3_MOUSE
8 PsiBlast_PDB 52.6543% 12 - C1 -4EL9 6.8 KS6A3_MOUSE
7 PsiBlast_PDB 52.2343% 3 - C1 -3UBD 7.1 KS6A3_MOUSE
12 PsiBlast_PDB 50.8342% 12 - C1 -2Z7S 6.6 KS6A1_HUMAN
10 PsiBlast_PDB 50.6942% 11 - C1 -2Z7Q 4.7 KS6A1_HUMAN
11 PsiBlast_PDB 49.4842% 23 - C1 -2Z7R 6.8 KS6A1_HUMAN
17 PsiBlast_PDB 47.9044% 19 - C1 -3A61 7.6 KS6B1_HUMAN