@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_34_0990: (2018-07-13 )
MRAKIDDENSSVAVTLLPSAQVEPLASSQPPTRTGAVGTMVNTDAIDARGNDAESSGGGSAPSSMATTTTINAVFYNPSAQLPTPPPLHRNSSSPAPMQHLQHEEPQRLRAVPYFPASCESDSNEEPLFQHPPPAKPRAPLRPAPQSGRLWGAVSATPSSAGFVSGGTAPYASLLHTSSAPAVADTETSSTTAGHGLVVGCETSNHCLPASIKAHPPASATSPASIHGGYSDSVSDSTATTTVGNHSSGGRGLRRPPLMTGPNGAAVPLASPMLSGPQGRWVRSSGDESSSGFATLAVPAAPANLGDTVLVAEPPTPTKQRRTIHTGMGNTVSLSCGGIGAAPRLSTSAAASTGTCASAAAATSAAAVAGGASPKPSLRIAAPFRGLGYNPAANSVSAPASRATTSSMSTAPPPPSFKCYRREGSRKRSADVLSQFSALDLDETPATPFAQTGTSRFTSINHNGNGHNAFPSQPSPSTAVYRGAGGGSNAISTVSPLTIDYATPVALSQQIGGSNTFSQVLLHPSQDVLDMSQAETECSNFLARRILKEYNEVRLLGSGSFGTVSLFKEISSGEYVAVKMSPPLRTPEMERRYRRERSVMGMVRGLPHVVQLSAAWEEGRVPRMYLQLEYCPGGSVASVANAKQSRNEPWPEAEVKVFLAHMSIALDALHRANIAHVDFKPDNVLVDKDGAYKLSDFGCSVLLDERGRPRPETRNGYGSLARGQRAGWVGGVACANPNGGPAVHTGAGVGAGGLGSSLDFNNWNEGNELSTMSIDEGDCRYLCADMLNEKQHFKAGDMFSLGMSLFELMSGQPLPRNGDQFLALRRRVPVEVLRRRGYSADLVELVVALLRSDPPQRPTARQVLQYLRLSSEELQLLSSASAMKRWTESAESFLQLQEEERQQPPLGKDGVLAATVDALRCVSALMEASMWLFTTTQQDVHRLAAPANAGKGEDEEDERRRQQTQQPQPQPLLQLPRGQQLEDLPMSPIQCDEACTPTALNY

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4KK_A_3(4YVE)
ROCK1_HUMAN
[Raw transfer]




4TW_A_3(5BML)
ROCK1_HUMAN
[Raw transfer]




6U1_A_3(5KKS)
ROCK1_HUMAN
[Raw transfer]




4KH_A_3(4YVC)
ROCK1_HUMAN
[Raw transfer]




7LV_A_2(5TVT)
MELK_HUMAN
[Raw transfer]




M77_D_4(2ESM)
ROCK1_HUMAN
[Raw transfer]




M77_E_5(2F2U)
ROCK2_BOVIN
[Raw transfer]




65R_A_3(5HVU)
ROCK1_HUMAN
[Raw transfer]




Y27_C_3(2H9V)
ROCK2_BOVIN
[Raw transfer]




Y27_C_3(2ETR)
ROCK1_HUMAN
[Raw transfer]




H52_A_3(3D9V)
ROCK1_HUMAN
[Raw transfer]




HFS_C_3(2ETK)
ROCK1_HUMAN
[Raw transfer]




1WU_A_3(4L6Q)
ROCK2_HUMAN
[Raw transfer]




EDO_A_5(5VCZ)
PMYT1_HUMAN
[Raw transfer]




DMS_A_7(5VCY)
PMYT1_HUMAN
[Raw transfer]




EDO_A_4(5VCZ)
PMYT1_HUMAN
[Raw transfer]




28 HHSearch 77.8433% -38 - C1 -5VCY 3.5 PMYT1_HUMAN
27 HHSearch 77.7633% -38 - C1 -5VCZ 3.1 PMYT1_HUMAN
49 Fugue 68.5916% 6 - C1 -3C4Z - RK_BOVIN -
33 HHSearch 66.9924% -86 - C1 -4XBR - INKA1_HUMAN (first) -
40 HHSearch 65.3025% -87 - C1 -5TVT 8.8 MELK_HUMAN
35 HHSearch 64.4825% -86 - C1 -5K00 - MELK_HUMAN -
29 HHSearch 63.5028% -2 - C1 -2Y7J - PHKG2_HUMAN -
48 Fugue 62.6317% 31 - C1 -2ACX - GRK6_HUMAN -
51 Fugue 62.3923% -42 - C1 -5KCV - AKT1_HUMAN -
30 HHSearch 60.9728% 2 - C1 -2Y7J - PHKG2_HUMAN -
24 HHSearch 58.7723% -13 - C1 -3C0I - CSKP_HUMAN -
23 HHSearch 57.8623% -14 * C1 *3C0G - CSKP_HUMAN -
50 Fugue 57.3821% 11 - C1 -4XHG - ? -
41 HHSearch 56.2219% -66 - C1 -3CBL - -
37 HHSearch 55.8419% -63 - C1 -3BKB - -
31 HHSearch 54.4324% -66 - C1 -2X4F - MYLK4_HUMAN -
45 Fugue 51.3318% 6 - C1 -1KOB - ? -
26 HHSearch 50.9221% -58 - C1 -1TKI - TITIN_HUMAN -
32 HHSearch 50.0622% -49 - C1 -4NIF - KS6A1_HUMAN -
46 Fugue 49.8718% -33 - C1 -1TKI - TITIN_HUMAN -
16 PsiBlast_PDB 40.9233% -53 - C1 -4YVC 5.2 ROCK1_HUMAN
5 PsiBlast_PDB 39.7231% 10 - C1 -4L6Q 4.5 ROCK2_HUMAN
1 PsiBlast_PDB 35.2130% 14 - C1 -2F2U 4.8 ROCK2_BOVIN
2 PsiBlast_PDB 34.8830% 9 - C1 -2H9V 4.8 ROCK2_BOVIN
12 PsiBlast_PDB 34.5033% -1 - C1 -2ETR 4.2 ROCK1_HUMAN
20 PsiBlast_PDB 33.7033% -1 - C1 -5KKS 7.6 ROCK1_HUMAN
19 PsiBlast_PDB 33.2033% -5 - C1 -5HVU 7.2 ROCK1_HUMAN
10 PsiBlast_PDB 33.1433% 2 - C1 -2ESM 4.5 ROCK1_HUMAN
11 PsiBlast_PDB 33.1233% 2 - C1 -2ETK 4.6 ROCK1_HUMAN
17 PsiBlast_PDB 33.0033% -2 - C1 -4YVE 6.3 ROCK1_HUMAN
18 PsiBlast_PDB 32.3833% -2 - C1 -5BML 6.3 ROCK1_HUMAN
13 PsiBlast_PDB 31.7533% 2 - C1 -3D9V 5.3 ROCK1_HUMAN