@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_35_1020: (2018-07-13 )
MSSTLENCLVQGGRFRVGRRIGGGSFGEIFLGVDTQTGEAVAIKVERSKAVHPQLFSESRYYTLLSQGRGAAYMPTIFGYSSECEFNVMAMELMGFSLEDLHEKCGSRFSLKTTLMLADQILWLIELVHSHSILHRDIKPDNFIMGRGKKAHHVHIIDFGLAKKYRDSQTNMHIPYKEGKSLTGTARYCSINTHLGAEQSRRDDMEGIAYLLIYFLRGSLPWQGLKTATKEQKYGLIAHVKMSTSVESLCKGLPIEFASFLNYSRALRFEDRPDYGYLRSMFRRLFEREGYQEDYVYDWTVRSMYETLTARQRKNAAKRGKKQKENTREESDIFFERENTES

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PFO_A_3(4TN6)
KC1D_HUMAN
[Raw transfer]




0CK_A_5(3UYT)
KC1D_HUMAN
[Raw transfer]




1QM_A_5(4KBA)
KC1D_HUMAN
[Raw transfer]




1QN_A_5(4KB8)
KC1D_HUMAN
[Raw transfer]




1QJ_A_3(4KBC)
KC1D_HUMAN
[Raw transfer]




0CK_A_3(3UZP)
KC1D_HUMAN
[Raw transfer]




9WG_A_5(5W4W)
KC1D_HUMAN
[Raw transfer]




1QG_A_5(4KBK)
KC1D_HUMAN
[Raw transfer]




GOL_B_8(5X18)
KC11_YEAST
[Raw transfer]




ADP_A_9(5X17)
KC1D_MOUSE
[Raw transfer]




386_A_12(4TW9)
KC1D_HUMAN
[Raw transfer]




37J_B_18(4TWC)
KC1D_HUMAN
[Raw transfer]




37J_A_9(4TWC)
KC1D_HUMAN
[Raw transfer]




37J_A_9(4TWC)
KC1D_HUMAN
[Raw transfer]




GOL_B_7(5X18)
KC11_YEAST
[Raw transfer]




AUG_A_6(5IH6)
KC1D_HUMAN
[Raw transfer]




BRK_A_2(2IZR)
KC1G3_HUMAN
[Raw transfer]




2KC_A_2(4NFN)
TTBK1_HUMAN
[Raw transfer]




16W_A_3(4HNF)
KC1D_HUMAN
[Raw transfer]




15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]




DTQ_A_3(4BTK)
TTBK1_HUMAN
[Raw transfer]




ADP_A_2(4XHG)
?
[Raw transfer]




F8E_B_10(4BTM)
TTBK1_HUMAN
[Raw transfer]




2 PsiBlast_PDB 95.5960%-105 - C1 -4TN6 8.5 KC1D_HUMAN
17 PsiBlast_PDB 95.4360% -97 - C1 -5X17 6.2 KC1D_MOUSE
5 PsiBlast_PDB 95.2460% -97 - C1 -3UYT 8.0 KC1D_HUMAN
23 HHSearch 94.7660% -96 - C1 -4TWC 4.4 KC1D_HUMAN
24 HHSearch 94.1160%-101 - C1 -4TWC 8.0 KC1D_HUMAN
14 PsiBlast_PDB 93.9260%-100 - C1 -1CKJ - KC1D_RAT -
20 PsiBlast_PDB 93.9060% -97 - C1 -4TWC 7.9 KC1D_HUMAN
6 PsiBlast_PDB 93.7760% -96 - C1 -3UZP 8.1 KC1D_HUMAN
18 PsiBlast_PDB 93.6860% -99 - C1 -5MQV - KC1D_HUMAN -
26 HHSearch 93.6557%-112 - C1 -5FQD - KC1A_HUMAN -
11 PsiBlast_PDB 93.6460%-102 - C1 -4KBK 7.1 KC1D_HUMAN
8 PsiBlast_PDB 93.0360%-104 - C1 -4HGT 6.9 KC1D_HUMAN
12 PsiBlast_PDB 92.9260% -94 - C1 -5W4W 7.4 KC1D_HUMAN
27 HHSearch 92.5860%-101 - C1 -3SV0 - ? -
16 PsiBlast_PDB 92.5060% -96 - C1 -4KBC 6.6 KC1D_HUMAN
15 PsiBlast_PDB 92.0960%-102 - C1 -1CKI - KC1D_RAT -
7 PsiBlast_PDB 92.0660% -99 - C1 -4HNF 6.5 KC1D_HUMAN
3 PsiBlast_PDB 91.7660%-101 - C1 -5IH6 6.0 KC1D_HUMAN
19 PsiBlast_PDB 91.7060%-102 - C1 -4TW9 6.0 KC1D_HUMAN
13 PsiBlast_PDB 91.6360%-107 - C1 -4JJR - KC1D_MOUSE -
45 Fugue 91.4647% -94 - C1 -4XHG 3.8 ?
9 PsiBlast_PDB 89.1360%-112 - C1 -4KB8 7.1 KC1D_HUMAN
10 PsiBlast_PDB 87.2360%-109 - C1 -4KBA 7.4 KC1D_HUMAN
25 HHSearch 81.0347% -58 - C1 -5X18 3.3 KC11_YEAST
22 HHSearch 79.8949% -56 - C1 -2IZR 4.5 KC1G3_HUMAN
34 HHSearch 71.7735% -38 - C1 -4NFN 8.3 TTBK1_HUMAN
30 HHSearch 71.5836% -44 - C1 -4BTK 5.7 TTBK1_HUMAN
31 HHSearch 70.5136% -36 - C1 -4BTM 5.6 TTBK1_HUMAN