@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MPK11: (2018-07-14 )
MPATKSLAELQAEVCRLDDRYLLERIIGAGSYGVVIRARDTKSDNRLVAMKRVNKEIFEEVILAKRILREIKLLAHFNDDNIIGLRNILTPEDPENFDHFYIVMDIMETDLKQVLRSGQELTEAHIQFFIYQALRALHIIHSAGVIHRDITPANILVNTNCDLKICDFGLAKEENDQGEYMTDYVTMRWYRAPELVMEDKDYSAQIDVWGIGCILGELLGSRPLFQGKDRVNQLDKIVDVIGTPSEEDINSVGSSAAQKYLKKKSHRPQADWRQRYPTASPEALDLLRHMLVFNPKRRITVLQAMRHPFLEQLHDDADDNLSYALFRFDENEQKTIVDVKRAIYEESVKFHNEHPSSMRATTMYSAFNTPSVAAPSVATEGEGRSAQQTIEKNIPENVADGNFDREQV

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

38Z_A_12(4QTA)
MK01_HUMAN
[Raw transfer]




4V8_A_2(5BUE)
MK01_HUMAN
[Raw transfer]




4VB_A_2(5BUJ)
MK01_HUMAN
[Raw transfer]




ANP_A_4(4QNY)
?
[Raw transfer]




ANP_A_4(4QNY)
?
[Raw transfer]




ANP_B_7(4QNY)
?
[Raw transfer]




ANP_B_7(4QNY)
?
[Raw transfer]




6QB_A_2(5K4I)
MK01_HUMAN
[Raw transfer]




362_A_3(4QP8)
MK01_HUMAN
[Raw transfer]




35X_A_2(4QP9)
MK01_HUMAN
[Raw transfer]




19A_C_3(2OJG)
MK01_HUMAN
[Raw transfer]




82A_A_3(2OJJ)
MK01_HUMAN
[Raw transfer]




4V9_A_3(5BUI)
MK01_HUMAN
[Raw transfer]




33A_A_3(2OJI)
MK01_HUMAN
[Raw transfer]




363_A_3(4QP7)
MK01_HUMAN
[Raw transfer]




E57_A_2(4FV6)
MK01_HUMAN
[Raw transfer]




GOL_B_7(3N9X)
?
[Raw transfer]




YIX_A_2(2YIX)
MK14_HUMAN
[Raw transfer]




4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]




OLO_C_3(4ERK)
MK01_RAT
[Raw transfer]




CQ8_A_3(4ZZN)
MK01_HUMAN
[Raw transfer]




36O_A_3(4QP4)
MK01_HUMAN
[Raw transfer]




TT4_A_2(4XNE)
MK01_RAT
[Raw transfer]




SB4_B_2(3ERK)
MK01_RAT
[Raw transfer]




EDO_A_16(4QTE)
MK01_HUMAN
[Raw transfer]




23 HHSearch 98.53100%-124 - C1 -4QNY 5.3 ?
21 PsiBlast_CBE 98.53100%-124 - C1 -4QNY 5.3 ?
22 HHSearch 97.95100%-130 - C1 -4QNY 5.3 ?
1 PsiBlast_PDB 97.95100%-130 - C1 -4QNY 5.3 ?
7 PsiBlast_PDB 75.9143%-129 - C1 -5BUJ 6.6 MK01_HUMAN
5 PsiBlast_PDB 75.0643%-125 - C1 -5BUE 8.1 MK01_HUMAN
30 HHSearch 72.5045%-119 - C1 -5CI6 - MPK6_ARATH -
2 PsiBlast_PDB 69.9242% -63 - C1 -4IZ7 - MK01_HUMAN -
9 PsiBlast_PDB 69.5243% -67 - C1 -4QP7 3.8 MK01_HUMAN
12 PsiBlast_PDB 68.8743% -69 - C1 -5K4I 6.8 MK01_HUMAN
11 PsiBlast_PDB 68.6443% -67 - C1 -4QP9 7.3 MK01_HUMAN
8 PsiBlast_PDB 68.6243% -67 - C1 -4QP4 4.0 MK01_HUMAN
3 PsiBlast_PDB 68.6043% -70 - C1 -4QTA 8.4 MK01_HUMAN
20 PsiBlast_PDB 68.4643% -59 - C1 -2OJJ 7.6 MK01_HUMAN
18 PsiBlast_PDB 68.4543% -56 - C1 -2OJG 6.4 MK01_HUMAN
19 PsiBlast_PDB 68.2443% -58 - C1 -2OJI 6.2 MK01_HUMAN
16 PsiBlast_PDB 68.0943% -57 - C1 -3ERK 5.2 MK01_RAT
15 PsiBlast_PDB 67.9143% -55 - C1 -1ERK - MK01_RAT -
32 HHSearch 67.4143% -57 * C1 *4XNE 4.7 MK01_RAT
10 PsiBlast_PDB 67.3343% -47 - C1 -4QP8 5.5 MK01_HUMAN
6 PsiBlast_PDB 67.2843% -60 - C1 -5BUI 6.7 MK01_HUMAN
26 HHSearch 67.1738% -67 - C1 -3N9X 2.8 ?
29 HHSearch 66.8843% -60 - C1 -4ZZN 6.3 MK01_HUMAN
17 PsiBlast_PDB 66.8743% -57 - C1 -4ERK 4.3 MK01_RAT
4 PsiBlast_PDB 66.5743% -53 - C1 -4QTE 2.7 MK01_HUMAN
13 PsiBlast_PDB 65.9843% -56 - C1 -4FV6 8.9 MK01_HUMAN
31 HHSearch 57.9140% -41 - C1 -2YIX 8.3 MK14_HUMAN
25 HHSearch 57.5546% -20 - C1 -5BYZ 7.9 MK07_HUMAN