@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MPK3: (2018-07-14 )
MHKSNQELSVPKIVGDFKVYNVSGSPFEVPSKYTLLKILGMGAYGIACSCLDGDTGEKVSIKKCRDVFRDVEDGKRVLREIDMMRFFHHENLLNVVNILPPLKREYHSFEDVYVVTPLMDVDMNVVLRSRQVLEESHMQYFVYQILRGLKYLHSANVAHRDLKPANLVTNISCELKIIDFGLSRSVDVPYSELTDYVITRWYRPPELLLENTNYSTAVDIWSVGCIFAEMYNRKPVFPGRNTMDQLRMIAQHIGKPPASIVEHREALEKLNELPDGSLNIPKLVPGLAGNTEGIDFLSKMWTLDPSKRPTAADMLAHPYLAHLHDEEDEPTCPCPFLWAHESTPMGVSELRRAFWADIVDYNPSLEQATPPVTTAGGSSSKNGSGHHH

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

046_A_2(4O2Z)
?
[Raw transfer]



046_A_2(4O2Z)
?
[Raw transfer]



4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]



CQ8_A_3(4ZZN)
MK01_HUMAN
[Raw transfer]
21 HHSearch 99.6599%-115 - C1 -4O2Z 11.4 ?
1 PsiBlast_PDB 99.6599%-115 - C1 -4O2Z 11.4 ?
12 PsiBlast_PDB 72.1639% -88 - C1 -3FLW - MK14_HUMAN -
32 HHSearch 71.7140% -99 - C1 -2YIX - MK14_HUMAN -
18 PsiBlast_PDB 71.5339% -89 - C1 -3FMN - MK14_HUMAN -
16 PsiBlast_PDB 71.4139% -90 - C1 -3FMJ - MK14_HUMAN -
15 PsiBlast_PDB 71.3839% -85 - C1 -3FMH - MK14_HUMAN -
19 PsiBlast_PDB 71.1839% -90 - C1 -3FSF - MK14_HUMAN -
27 HHSearch 70.9240% -93 - C1 -3COI - MK13_HUMAN -
28 HHSearch 70.8140%-101 - C1 -2FST - MK14_HUMAN -
8 PsiBlast_PDB 70.7939% -85 - C1 -3FKN - MK14_HUMAN -
7 PsiBlast_PDB 70.7939% -85 - C1 -3FKL - MK14_HUMAN -
20 PsiBlast_PDB 70.6439% -90 - C1 -3FSK - MK14_HUMAN -
9 PsiBlast_PDB 70.3539% -91 - C1 -3FL4 - MK14_HUMAN -
29 HHSearch 70.3440% -96 - C1 -4YNO - MK13_HUMAN -
13 PsiBlast_PDB 70.1339% -86 - C1 -3FLY - MK14_HUMAN -
6 PsiBlast_PDB 69.8039% -85 - C1 -2GFS - MK14_HUMAN -
11 PsiBlast_PDB 69.3239% -90 - C1 -3FLS - MK14_HUMAN -
5 PsiBlast_PDB 69.3039% -83 - C1 -1OZ1 - MK14_HUMAN -
14 PsiBlast_PDB 68.9839% -86 - C1 -3FLZ - MK14_HUMAN -
22 HHSearch 64.5440% -69 - C1 -5BYZ 5.4 MK07_HUMAN
30 HHSearch 58.9741% -51 * C1 *4ZZN 4.9 MK01_HUMAN