@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MRK1: (2018-07-14 )
MTGRFTRPQWSLATGRHYASSGHSAASSCSTHTLKVNQTESYRPGPDDSGTYSANLRDSPSRTMSNTSVSVSPMDSSSPQEWGRSFRLFNSCRFLTSASGSRQRDGSIGQLYRSTFLHGRQGRGSSVGPEAERPLLGSSMIHQPQSSFFGAFSGQGGRYSFWPPDVNASGVLTAASPYAASNPSAPLSTASPLLGSSRFLGTGISPRGLADGHAVHRVVASCAMGSVVCTVSPGQNELPLAMNALRTHLALRGKTIIQGDAAHPLEIRKGPLIGAGGFAKVFAGVDTVRGELVAIKEIDISGVDDVKALNAIEAEFALLKSLHHPNIVSYSLFEHSKSQKVCRIAMELLAGDSTLHLLQKFGPLTEAVLRIVARSVLRAIRFIHKEGIFHRDIKPANILVSHRGEVKLCDFGCSKRVSELNKAASCIIGTPVYMAPEFIKGEANHKADIWSMACALFELSTGLLPWYHSGVKDNLPLMFYITTTSESPMVLPSPEAKSEFSAEFLSFMELCFTRNVANRPEADDLLKHPWITGSRLAPVPNLPSAVLSLHQESSAVFRAFGSPGKSSTFSSPRDSAADRDDMSFNGSDGLQKSVSTTPTLNPAEEEMACQQELETVAAATALELCSLLVCSLEIPPRTAQETVTGEVGSGTGDTSPSLTRTFSIHSPALSHRGGGVSASVAEFLSPVYTPEHSMVHENFYYSQVPLGASAGNFVLPPGLDLDGAPPQQQYLRINEEGNLDMVYLPGDEMEDSVHGRSTFGDSVYGSFHAGRIVSPARNSSFSRGTLSPRVAAGPNTVGVADGPFSPLLGISGVFSRRESPSRGGPSVPSSPQGIPAPPLLYRPGPSTTFVSQPSSHTGSMHTSHVSPTSTSKAGSNVDAATPHTPRSNSPTSTQRSESFRGLPEKLKTHADGKLHMSFSVNTAPGCAVNVELNVDVADVQCKVVDNQPNFVVAFTDDVRSQIANKIKEVAEHSSSGKPAQTAGTHASSLSPLCGMEARRSVSAGGGHFYNSPLFAAASKATPRPLSRVSTGSAQRLVAVPREALAGYSSYSGEEGSDVDSHTSSPVTAGWNERVGK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(3A7J)
STK24_HUMAN
[Raw transfer]




3JB_A_2(4W8E)
STK24_HUMAN
[Raw transfer]




ADP_B_4(4O27)
STK24_HUMAN
[Raw transfer]




3JA_A_2(4W8D)
STK24_HUMAN
[Raw transfer]




ANP_A_4(4QML)
STK24_HUMAN
[Raw transfer]




3FE_A_3(4U8Z)
STK24_HUMAN
[Raw transfer]




ATP_A_3(3A7H)
STK24_HUMAN
[Raw transfer]




6G2_A_2(5J5T)
M4K3_HUMAN
[Raw transfer]




GOL_A_4(5O2C)
WNK3_HUMAN
[Raw transfer]




35R_A_2(4QMM)
STK24_HUMAN
[Raw transfer]




34L_A_3(4QMO)
STK24_HUMAN
[Raw transfer]




STU_A_2(3CKX)
STK24_HUMAN
[Raw transfer]




DKI_A_3(4QMP)
STK24_HUMAN
[Raw transfer]




34U_A_2(4QMQ)
STK24_HUMAN
[Raw transfer]




J60_B_3(4NZW)
STK25_HUMAN
[Raw transfer]




ADE_A_2(3A7I)
STK24_HUMAN
[Raw transfer]




J60_A_3(2XIK)
STK25_HUMAN
[Raw transfer]




DB8_A_2(4QMN)
STK24_HUMAN
[Raw transfer]




EDO_A_4(5VCZ)
PMYT1_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




1 PsiBlast_PDB 74.6736% -69 - C1 -2XIK 3.9 STK25_HUMAN
8 PsiBlast_PDB 72.3735% -63 - C1 -4O27 5.4 STK24_HUMAN
41 HHSearch 72.1228% -95 - C1 -4XBR - INKA1_HUMAN (first) -
5 PsiBlast_PDB 72.0635% -14 - C1 -4W8D 5.9 STK24_HUMAN
4 PsiBlast_PDB 71.3935% -19 - C1 -4U8Z 6.6 STK24_HUMAN
20 PsiBlast_PDB 71.3135% -13 - C1 -4QMQ 8.0 STK24_HUMAN
6 PsiBlast_PDB 71.1035% -14 - C1 -4W8E 7.5 STK24_HUMAN
9 PsiBlast_PDB 70.8735% -65 - C1 -3CKX 7.9 STK24_HUMAN
16 PsiBlast_PDB 70.6735% -14 - C1 -4QMM 5.8 STK24_HUMAN
2 PsiBlast_PDB 70.3436% -87 - C1 -4NZW 5.7 STK25_HUMAN
15 PsiBlast_PDB 70.1935% -12 - C1 -4QML 5.7 STK24_HUMAN
18 PsiBlast_PDB 70.1335% -13 - C1 -4QMO 6.1 STK24_HUMAN
19 PsiBlast_PDB 70.0635% -14 - C1 -4QMP 6.0 STK24_HUMAN
13 PsiBlast_PDB 70.0435% -13 - C1 -3A7I 5.7 STK24_HUMAN
7 PsiBlast_PDB 69.6935% -70 - C1 -3ZHP - STK24_HUMAN -
14 PsiBlast_PDB 69.4735% -14 - C1 -3A7J 6.8 STK24_HUMAN
12 PsiBlast_PDB 69.2835% -12 - C1 -3A7H 5.8 STK24_HUMAN
28 HHSearch 68.6631% -84 - C1 -5J5T - M4K3_HUMAN -
3 PsiBlast_PDB 68.2933% -97 - C1 -5J5T 6.3 M4K3_HUMAN
10 PsiBlast_PDB 68.2135% -13 - C1 -3A7F - STK24_HUMAN -
17 PsiBlast_PDB 67.3435% -11 - C1 -4QMN 6.3 STK24_HUMAN