@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GRP75_HUMAN: (2018-10-05 )
MISASRAAAARLVGAAASRGPTAARHQDSWNGLSHEAFRLVSRRDYASEAIKGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDSSGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEEFKDQLPADECNKLKEEISKMRELLARKDSETGENIRQAASSLQQASLKLFEMAYKKMASEREGSGSSGTGEQKEDQKEEKQ

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(2V7Y)
DNAK_GEOKA
[Raw transfer]




ADP_A_2(2V7Y)
DNAK_GEOKA
[Raw transfer]




ATP_B_5(5TKY)
SSB1_CHATD
[Raw transfer]




ATP_A_4(4JNE)
DNAK_ECOLI
[Raw transfer]




ATP_A_3(5NRO)
DNAK_ECOLI
[Raw transfer]




ADP_A_5(2V7Z)
HSP7C_RAT
[Raw transfer]




ADP_A_4(6EOE)
BIP_CRIGR
[Raw transfer]




ATP_A_3(5TKY)
SSB1_CHATD
[Raw transfer]




ATP_A_3(5TKY)
SSB1_CHATD
[Raw transfer]




ADP_A_3(3I33)
HSP72_HUMAN
[Raw transfer]




ADP_A_7(1QQM)
HSP7C_BOVIN
[Raw transfer]




ADP_A_2(6EOF)
BIP_CRIGR
[Raw transfer]




ATP_B_22(6ASY)
BIP_HUMAN
[Raw transfer]




ATP_A_4(4JN4)
DNAK_ECOLI
[Raw transfer]




ATP_A_8(6ASY)
BIP_HUMAN
[Raw transfer]




ATP_B_13(4JNE)
DNAK_ECOLI
[Raw transfer]




ADP_A_2(6EOF)
BIP_CRIGR
[Raw transfer]




ADP_A_2(4J8F)
F10A1_RAT
[Raw transfer]




ADP_B_14(3C7N)
HSP7C_BOVIN
[Raw transfer]




DTP_A_5(5F0X)
BIP_HUMAN
[Raw transfer]




TMO_A_2(4FL9)
HSP7C_BOVIN
[Raw transfer]




30 HHSearch 87.1465% -67 - C2 -2V7Y 7.8 DNAK_GEOKA
6 PsiBlast_PDB 86.4362% -71 - C2 -2V7Y 7.8 DNAK_GEOKA
22 HHSearch 85.4662% 19 - C2 -4JNE 9.7 DNAK_ECOLI
3 PsiBlast_PDB 84.7461% 18 - C2 -4JN4 9.6 DNAK_ECOLI
21 HHSearch 84.4962% 19 - C2 -4B9Q - DNAK_ECOLI -
4 PsiBlast_PDB 84.2361% 19 - C2 -4JNE 9.5 DNAK_ECOLI
5 PsiBlast_PDB 84.1460% 19 - C2 -4B9Q - DNAK_ECOLI -
2 PsiBlast_PDB 83.3361% 18 - C2 -5NRO 9.8 DNAK_ECOLI
1 PsiBlast_PDB 79.4461% 21 - C2 -2KHO - DNAK_ECOLI -
20 PsiBlast_PDB 77.1646% 21 - C2 -5TKY 8.2 SSB1_CHATD
19 PsiBlast_PDB 77.1265% -80 - C2 -1DKG - DNAK_ECOLI -
23 HHSearch 76.1646% 18 - C2 -5TKY 8.1 SSB1_CHATD
8 PsiBlast_PDB 76.0056% 19 - C2 -6ASY 9.1 BIP_HUMAN
26 HHSearch 75.6052% 42 * C2 *6ASY 9.5 BIP_HUMAN
24 HHSearch 75.5446% 19 - C2 -5TKY 8.6 SSB1_CHATD
10 PsiBlast_PDB 75.5054% 18 - C2 -5E84 - BIP_HUMAN -
12 PsiBlast_PDB 74.8855% 23 - C2 -4FL9 2.9 HSP7C_BOVIN
16 PsiBlast_PDB 74.6157% 18 - C2 -6EOE 7.2 BIP_CRIGR
11 PsiBlast_PDB 74.6155% 11 - C2 -1YUW - HSP7C_BOVIN -
31 HHSearch 74.5265% - - C2 -4ANI - DNAK_GEOKA -
17 PsiBlast_PDB 74.0157% 22 - C2 -6EOF 7.2 BIP_CRIGR
33 HHSearch 72.4958% 36 - C2 -6EOF 7.2 BIP_CRIGR
9 PsiBlast_PDB 72.2755% 18 - C2 -3C7N 5.5 HSP7C_BOVIN
34 HHSearch 64.4752% -14 - C2 -4J8F 6.5 F10A1_RAT (first)
38 HHSearch 63.3853% -9 - C2 -1QQM 6.9 HSP7C_BOVIN
41 HHSearch 62.9053% -2 - C2 -3I33 7.7 HSP72_HUMAN
13 PsiBlast_PDB 62.0555% -4 - C2 -2V7Z 5.6 HSP7C_RAT
35 HHSearch 61.0655% 23 - C2 -5F0X 5.9 BIP_HUMAN