@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : P73_HUMAN: (2018-10-06 )
MAQSTATSPDGGTTFEHLWSSLEPDSTYFDLPQSSRGNNEVVGGTDSSMDVFHLEGMTTSVMAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTMSPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPSHLQPPSYGPVLSPMNKVHGGMNKLPSVNQLVGQPPPHSSAATPNLGPVGPGMLNNHGHAVPANGEMSSSHSAQSMVSGSHCTPPPPYHADPSLVSFLTGLGCPNCIEYFTSQGLQSIYHLQNLTIEDLGALKIPEQYRMTIWRGLQDLKQGHDYSTAQQLLRSSNAATISIGGSGELQRQRVMEAVHFRVRHTITIPNRGGPGGGPDEWADFGFDLPDCKARKQPIKEEFTEAEIH

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_7(5AOK)
P53_HUMAN
[Raw transfer]




GOH_B_9(5AOK)
P53_HUMAN
[Raw transfer]




2 PsiBlast_PDB 81.1198% -94 - C3 -4A63 - P73_HUMAN -
28 HHSearch 80.4299% -89 - C3 -4A63 - P73_HUMAN -
9 PsiBlast_PDB 79.16100% -86 - C3 -4GUO - P73_HUMAN -
5 PsiBlast_PDB 78.93100% -89 - C3 -3VD1 - P73_HUMAN -
1 PsiBlast_PDB 78.5798% -75 - C3 -2XWC - P73_HUMAN -
10 PsiBlast_PDB 78.0299% -85 - C3 -4GUQ - P73_HUMAN -
8 PsiBlast_PDB 78.01100% -91 - C3 -4G83 - P73_HUMAN -
11 PsiBlast_PDB 77.3781% -98 - C3 -2RMN - P63_HUMAN -
7 PsiBlast_PDB 77.22100% -81 - C3 -4G82 - P73_HUMAN -
22 HHSearch 77.1483% -98 - C3 -2RMN - P63_HUMAN -
6 PsiBlast_PDB 76.93100% -71 - C3 -3VD2 - P73_HUMAN -
3 PsiBlast_PDB 76.17100% -78 - C3 -5KBD - P73_HUMAN -
4 PsiBlast_PDB 76.06100% -81 - C3 -3VD0 - P73_HUMAN -
13 PsiBlast_PDB 71.9385% -92 - C3 -3QYN - P63_HUMAN -
14 PsiBlast_PDB 71.6485% -90 - C3 -3US0 - P63_HUMAN -
16 PsiBlast_PDB 71.4685% -88 - C3 -3US2 - P63_HUMAN -
15 PsiBlast_PDB 70.7585% -89 - C3 -3US1 - P63_HUMAN -
12 PsiBlast_PDB 70.7485% -95 - C3 -3QYM - P63_HUMAN -
18 PsiBlast_PDB 69.9448% -87 - C3 -3Q05 - P53_HUMAN -
20 PsiBlast_PDB 69.8348% -96 - C3 -3Q01 - P53_HUMAN -
23 HHSearch 68.0658% -88 - C3 -5AOK 5.6 P53_HUMAN