@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NGAL_HUMAN: (2018-10-04 )
MPLGLLWLGLALLGALHAQAQDSTSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGCQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCIDG

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EB4_A_17(3CMP)
NGAL_HUMAN
[Raw transfer]




TC2_A_8(3HWF)
NGAL_HUMAN
[Raw transfer]




4OL_A_8(4ZHF)
NGAL_HUMAN
[Raw transfer]




4OL_A_8(4ZHG)
NGAL_HUMAN
[Raw transfer]




4OL_A_8(4ZHG)
NGAL_HUMAN
[Raw transfer]




4OL_C_17(4ZHH)
NGAL_HUMAN
[Raw transfer]




4OL_A_8(4ZHH)
NGAL_HUMAN
[Raw transfer]




QED_A_5(3HWG)
NGAL_HUMAN
[Raw transfer]




1OD_A_9(4K19)
NGAL_HUMAN
[Raw transfer]




2DS_A_7(3I0A)
NGAL_HUMAN
[Raw transfer]




TC2_A_5(4ZHC)
NGAL_HUMAN
[Raw transfer]




RKS_A_6(3HWE)
NGAL_HUMAN
[Raw transfer]




4OZ_A_5(4ZHD)
NGAL_HUMAN
[Raw transfer]




DBH_A_11(1L6M)
NGAL_HUMAN
[Raw transfer]




DBH_A_11(3BY0)
NGAL_HUMAN
[Raw transfer]




DBH_A_8(3U0D)
NGAL_HUMAN
[Raw transfer]




EB4_A_5(4ZFX)
NGAL_HUMAN
[Raw transfer]




488_A_4(3U03)
NGAL_HUMAN
[Raw transfer]




NON_E_5(1QQS)
NGAL_HUMAN
[Raw transfer]




NON_E_5(1QQS)
NGAL_HUMAN
[Raw transfer]




9 PsiBlast_PDB 96.8798%-124 - C4 -3HWD - NGAL_HUMAN -
8 PsiBlast_PDB 96.7398%-128 - C4 -3I0A 5.0 NGAL_HUMAN
10 PsiBlast_PDB 96.4498%-120 - C4 -3BY0 3.5 NGAL_HUMAN
3 PsiBlast_PDB 95.9099%-120 - C4 -3HWG 7.4 NGAL_HUMAN
16 PsiBlast_PDB 95.8198%-119 - C4 -4ZHC 5.7 NGAL_HUMAN
18 PsiBlast_PDB 95.6498%-115 - C4 -4ZHF 8.2 NGAL_HUMAN
7 PsiBlast_PDB 95.6198%-125 - C4 -3CMP 3.8 NGAL_HUMAN
15 PsiBlast_PDB 95.5198%-124 - C4 -4ZFX 4.2 NGAL_HUMAN
5 PsiBlast_PDB 95.3699%-114 - C4 -3U03 4.8 NGAL_HUMAN
37 HHSearch 95.2299%-116 - C4 -4ZHG 7.8 NGAL_HUMAN
20 PsiBlast_PDB 95.1998%-117 - C4 -4ZHH 7.6 NGAL_HUMAN
4 PsiBlast_PDB 95.1899%-116 - C4 -3U0D 3.0 NGAL_HUMAN
14 PsiBlast_PDB 95.1098%-122 - C4 -4K19 8.5 NGAL_HUMAN
19 PsiBlast_PDB 95.0198%-116 - C4 -4ZHG 7.8 NGAL_HUMAN
38 HHSearch 94.8599%-116 - C4 -4ZHH 7.9 NGAL_HUMAN
17 PsiBlast_PDB 94.7898%-122 - C4 -4ZHD 4.5 NGAL_HUMAN
6 PsiBlast_PDB 94.7898%-114 - C4 -3CBC - NGAL_HUMAN -
1 PsiBlast_PDB 94.7799%-121 - C4 -3HWE 5.7 NGAL_HUMAN
13 PsiBlast_PDB 94.6198%-119 - C4 -1L6M 3.3 NGAL_HUMAN
2 PsiBlast_PDB 94.6199%-121 - C4 -3HWF 6.1 NGAL_HUMAN
40 HHSearch 93.0898%-125 - C4 -1QQS 2.5 NGAL_HUMAN
24 Fugue 74.3383% 5 - C4 -1QQS 2.3 NGAL_HUMAN