@TOME V2.3
(Mar 2018)

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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SPA12_HUMAN: (2018-10-04 )
MNPTLGLAIFLAVLLTVKGLLKPSFSPRNYKALSEVQGWKQRMAAKELARQNMDLGFKLLKKLAFYNPGRNIFLSPLSISTAFSMLCLGAQDSTLDEIKQGFNFRKMPEKDLHEGFHYIIHELTQKTQDLKLSIGNTLFIDQRLQPQRKFLEDAKNFYSAETILTNFQNLEMAQKQINDFISQKTHGKINNLIENIDPGTVMLLANYIFFRARWKHEFDPNVTKEEDFFLEKNSSVKVPMMFRSGIYQVGYDDKLSCTILEIPYQKNITAIFILPDEGKLKHLEKGLQVDTFSRWKTLLSRRVVDVSVPRLHMTGTFDLKKTLSYIGVSKIFEEHGDLTKIAPHRSLKVGEAVHKAELKMDERGTEGAAGTGAQTLPMETPLVVKIDKPYLLLIYSEKIPSVLFLGKIVNPIGK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_8(4Y3K)
SPA12_HUMAN
[Raw transfer]




4 PsiBlast_PDB 85.6099%-127 - C1 -4Y40 - SPA12_HUMAN -
3 PsiBlast_PDB 85.6099%-123 - C1 -4Y3K 3.3 SPA12_HUMAN
22 HHSearch 85.57100%-123 - C1 -4IF8 - SPA12_HUMAN -
2 PsiBlast_PDB 85.3899%-123 - C1 -4IF8 - SPA12_HUMAN -
21 HHSearch 82.19100%-107 - C- -5EI0 - SPA12_HUMAN -
1 PsiBlast_PDB 81.9699%-107 - C- -5EI0 - SPA12_HUMAN -
6 PsiBlast_PDB 69.1643%-133 - C1 -5CE0 - ? -
7 PsiBlast_PDB 66.4442% 11 - C1 -1HP7 - A1AT_HUMAN -
5 PsiBlast_PDB 66.3643% -98 - C1 -5CDZ - ? -
20 PsiBlast_PDB 65.7541% 8 - C1 -1OPH - A1AT_HUMAN -
19 PsiBlast_PDB 65.1241% 6 - C1 -1OO8 - A1AT_HUMAN -
8 PsiBlast_PDB 64.7842% 1 - C1 -2QUG - A1AT_HUMAN -
12 PsiBlast_PDB 64.2642% 3 - C1 -1QLP - A1AT_HUMAN -
16 PsiBlast_PDB 64.1242% 6 - C1 -1PSI - A1AT_HUMAN -
9 PsiBlast_PDB 64.1142% -6 - C1 -3DRM - ? -
15 PsiBlast_PDB 63.7042% 13 - C1 -1IZ2 - ? -
45 Fugue 63.5142% 30 - C1 -1QLP - A1AT_HUMAN -
13 PsiBlast_PDB 62.8642% 9 - C1 -4PYW - A1AT_HUMAN -
14 PsiBlast_PDB 62.6442% 5 - C1 -3DRU - A1AT_HUMAN -
38 HHSearch 62.6030% 10 * C1 *3H5C - ZPI_HUMAN -