@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SPB4_HUMAN: (2018-10-04 )
MNSLSEANTKFMFDLFQQFRKSKENNIFYSPISITSALGMVLLGAKDNTAQQISKVLHFDQVTENTTEKAATYHVDRSGNVHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYQFLQEYLDAIKKFYQTSVESTDFANAPEESRKKINSWVESQTNEKIKNLFPDGTIGNDTTLVLVNAIYFKGQWENKFKKENTKEEKFWPNKNTYKSVQMMRQYNSFNFALLEDVQAKVLEIPYKGKDLSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETCVDLHLPRFKMEESYDLKDTLRTMGMVNIFNGDADLSGMTWSHGLSVSKVLHKAFVEVTEEGVEAAAATAVVVVELSSPSTNEEFCCNHPFLFFIRQNKTNSILFYGRFSSP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_I_9(1TB6)
ANT3_HUMAN
[Raw transfer]




23 HHSearch 87.1091%-120 - C3 -4ZK0 - SPB3_HUMAN -
1 PsiBlast_PDB 87.1091%-120 - C3 -4ZK0 - SPB3_HUMAN -
22 HHSearch 86.3791%-121 - C- -4ZK3 - SPB3_HUMAN -
2 PsiBlast_PDB 86.3791%-121 - C- -4ZK3 - SPB3_HUMAN -
38 HHSearch 69.2136%-115 - C3 -3NDA - ? -
39 HHSearch 68.9436%-113 - C3 -3NDA - ? -
7 PsiBlast_PDB 66.9140% 8 - C3 -1JTI - OVAL_CHICK -
10 PsiBlast_PDB 66.3640% 10 - C3 -1OVA - OVAL_CHICK -
12 PsiBlast_PDB 65.7245% 33 - C3 -5CE0 - ? -
11 PsiBlast_PDB 65.6146% 23 - C3 -5CDZ - ? -
4 PsiBlast_PDB 65.4442% 22 - C3 -1BY7 - PAI2_HUMAN -
3 PsiBlast_PDB 64.7344% 18 - C3 -2DUT - SPB10_CHICK -
5 PsiBlast_PDB 64.4342% 32 - C3 -1JRR - PAI2_HUMAN -
18 PsiBlast_PDB 64.2038% 32 - C3 -1TB6 3.3 ANT3_HUMAN
8 PsiBlast_PDB 63.1142% 28 - C3 -2ARQ - ? -
19 PsiBlast_PDB 62.9438% 0 - C- -1T1F - ANT3_HUMAN -
17 PsiBlast_PDB 62.9438% 32 - C3 -2HIJ - ANT3_HUMAN -
25 HHSearch 62.8139% 33 - C3 -1ATT - ANT3_BOVIN -
9 PsiBlast_PDB 62.6542% 30 - C3 -2ARR - PAI2_HUMAN -
35 HHSearch 62.6036% 28 - C3 -1WZ9 - SPB5_HUMAN -