@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : TBB3_HUMAN: (2018-10-04 )
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEAQGPKENTREESDIFFERENTES

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_B_5(2WBE)
TBB2B_BOVIN
[Raw transfer]




GTP_A_7(5ND4)
TBA1B_BOVIN
[Raw transfer]




GDP_A_3(3CB2)
TBG1_HUMAN
[Raw transfer]




GDP_B_7(4UXP)
TBB2B_BOVIN
[Raw transfer]




GDP_B_7(4UXO)
TBB2B_BOVIN
[Raw transfer]




GTP_B_8(2P4N)
TBB2B_BOVIN
[Raw transfer]




GTP_B_4(3DCO)
TBB2B_BOVIN
[Raw transfer]




GTP_A_3(1TUB)
TBB_PIG
[Raw transfer]




GTP_C_7(2WBE)
TBB2B_BOVIN
[Raw transfer]




GTP_A_6(2HXH)
TBB_PIG
[Raw transfer]




GTP_A_5(1JFF)
TBB_PIG
[Raw transfer]




GTP_A_6(2HXF)
TBB_PIG
[Raw transfer]




GTP_A_4(5KMG)
TBB_PIG
[Raw transfer]




3 PsiBlast_PDB 93.9299% -85 - C2 -5IJ9 - TBB3_HUMAN -
2 PsiBlast_PDB 93.25100% -87 - C2 -5IJ0 - TBB3_HUMAN -
4 PsiBlast_PDB 93.2394% -88 - C2 -5KMG 3.1 TBB_PIG
38 HHSearch 93.1293% -86 - C2 -5IYZ - TBB2B_BOVIN -
1 PsiBlast_PDB 93.00100% -84 - C2 -5JCO - TBB3_HUMAN -
40 HHSearch 91.1494% -86 - C2 -5N5N - TBB5_HUMAN -
14 PsiBlast_PDB 90.4494% -80 - C2 -3DCO 6.8 TBB2B_BOVIN
18 PsiBlast_PDB 90.2994% -80 - C2 -3J2U - TBB2B_BOVIN -
13 PsiBlast_PDB 90.2694% -80 - C2 -3EDL - ? -
6 PsiBlast_PDB 90.1994% -81 - C2 -1JFF 3.2 TBB_PIG
11 PsiBlast_PDB 90.1594% -80 - C2 -2HXH 3.3 TBB_PIG
10 PsiBlast_PDB 90.1594% -80 - C2 -2HXF 3.3 TBB_PIG
12 PsiBlast_PDB 90.1494% -81 - C2 -2P4N 6.8 TBB2B_BOVIN
17 PsiBlast_PDB 90.0094% -81 - C2 -4ABO - TBB_PIG -
15 PsiBlast_PDB 90.0094% -80 - C2 -2WBE 5.8 TBB2B_BOVIN
16 PsiBlast_PDB 89.9994% -81 - C2 -3IZ0 - TBB2B_BOVIN -
8 PsiBlast_PDB 89.7294% -89 - C2 -1SA0 - TBB2B_BOVIN -
9 PsiBlast_PDB 88.9194% -82 - C2 -1SA1 - TBB2B_BOVIN -
20 PsiBlast_PDB 84.9594% - - C2 -4UXP 3.5 TBB2B_BOVIN
19 PsiBlast_PDB 84.9594% - - C2 -4UXO 3.5 TBB2B_BOVIN
21 Fugue 80.1194% -8 - C2 -1TUB 2.9 TBB_PIG
47 HHSearch 75.0543% -86 - C2 -5ND4 6.3 TBA1B_BOVIN
41 HHSearch 66.7133% -11 - C2 -3CB2 9.0 TBG1_HUMAN