@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GRAP_MOUSE: (2018-07-13 )
MESVALYSFQATESDELAFNKGDTLKILNMEDDQNWYKAELRGAEGFVPKNYIRVKPHPWYSGRISRQLAEETLMKRNHLGAFLIRESESSPGEFSVSVNYGDQVQHFKVLREASGKYFLWEEKFNSLNELVDFYRTTTIAKRRQIFLCDEQPLIKPSRACFAQAQFDFSAQDPSQLSLRRGDIVEVVEREDPHWWRGRAGGRLGFFPRSYVQPVHL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FYI_A_2(3IN8)
GRB2_HUMAN
[Raw transfer]




AYI_A_3(3IMJ)
GRB2_HUMAN
[Raw transfer]




FYQ_A_3(3IMD)
GRB2_HUMAN
[Raw transfer]




YEN_A_2(3KFJ)
GRB2_HUMAN
[Raw transfer]




AYQ_A_3(3IN7)
GRB2_HUMAN
[Raw transfer]




GOL_C_3(2H46)
GRB2_HUMAN
[Raw transfer]




GOL_B_7(3S8N)
GRB2_HUMAN
[Raw transfer]




GOL_B_3(3N8M)
GRB2_HUMAN
[Raw transfer]




ACE_I_9(1FYR)
GRB2_HUMAN
[Raw transfer]




1 PsiBlast_PDB 85.2657%-119 - C1 -1GRI - GRB2_HUMAN -
15 PsiBlast_PDB 68.3458%-144 - C1 -3S8N 2.8 GRB2_HUMAN
19 PsiBlast_PDB 68.2258%-146 - C1 -3OVE - GRB2_HUMAN -
13 PsiBlast_PDB 67.7658%-148 - C1 -3OV1 - GRB2_HUMAN -
14 PsiBlast_PDB 67.3158%-141 - C1 -3S8L - GRB2_HUMAN -
18 PsiBlast_PDB 66.4858%-140 - C1 -4P9Z - GRB2_HUMAN -
17 PsiBlast_PDB 66.0658%-146 - C1 -4P9V - GRB2_HUMAN -
5 PsiBlast_PDB 65.7658%-143 - C1 -3N84 - GRB2_HUMAN -
16 PsiBlast_PDB 65.2358%-138 - C1 -3S8O - GRB2_HUMAN -
3 PsiBlast_PDB 65.1659%-156 - C- -1BM2 - GRB2_HUMAN -
10 PsiBlast_PDB 64.9958%-147 - C1 -3IN8 8.2 GRB2_HUMAN
7 PsiBlast_PDB 64.5058%-145 - C1 -3IMD 7.1 GRB2_HUMAN
9 PsiBlast_PDB 63.9458%-154 - C1 -3IN7 7.5 GRB2_HUMAN
8 PsiBlast_PDB 63.0958%-154 - C1 -3IMJ 7.7 GRB2_HUMAN
11 PsiBlast_PDB 62.1558%-145 - C1 -3KFJ 7.0 GRB2_HUMAN
12 PsiBlast_PDB 62.0158%-148 - C1 -3N8M 2.8 GRB2_HUMAN
6 PsiBlast_PDB 59.6058%-155 - C1 -1FHS - GRB2_HUMAN -
2 PsiBlast_PDB 57.6760%-146 - C1 -1BMB - GRB2_HUMAN -
33 HHSearch 57.4135% 18 - C1 -4K11 - SRC_HUMAN -
31 HHSearch 55.3837% 33 - C1 -4U5W - HCK_HUMAN -
20 PsiBlast_PDB 51.0158% -98 - C1 -2H46 2.2 GRB2_HUMAN
4 PsiBlast_PDB 47.9865%-108 - C1 -1FYR 3.4 GRB2_HUMAN