@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AAKB1_HUMAN: (2018-07-12 )
MGNTSSERAALERHGGHKTPRRDSSGGTKDGDRPKILMDSPEDADLFHSEEIKAPEKEEFLAWQHDLEVNDKAPAQARPTVFRWTGGGKEVYLSGSFNNWSKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPEERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDGVMVLSATHRYKKKYVTTLLYKPI

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BCD_A_4(1Z0N)
AAKB1_RAT
[Raw transfer]



BCD_A_4(1Z0N)
AAKB1_RAT
[Raw transfer]



BCD_A_4(1Z0N)
AAKB1_RAT
[Raw transfer]



BCD_D_4(1Z0M)
AAKB1_RAT
[Raw transfer]



4CQ_B_10(4YEF)
AAKB1_RAT
[Raw transfer]



4CQ_A_8(4YEF)
AAKB1_RAT
[Raw transfer]



BCD_B_6(4RER)
AAKB2_HUMAN
[Raw transfer]



BCD_B_6(4RER)
AAKB2_HUMAN
[Raw transfer]



GOL_B_9(4Y0G)
AAKB2_RAT
[Raw transfer]
5 PsiBlast_PDB 83.4199% -93 - C1 -5ISO - AAKB1_HUMAN -
2 PsiBlast_PDB 81.0399% -91 - C1 -5EZV - AAKB1_HUMAN -
4 PsiBlast_PDB 80.7199%-100 - C1 -4CFF - AAKB1_HUMAN -
1 PsiBlast_PDB 80.6599% -92 - C1 -4ZHX - AAKB1_HUMAN -
7 PsiBlast_PDB 80.4896% -98 - C1 -4QFG - AAKB1_RAT -
3 PsiBlast_PDB 80.3799% -91 - C1 -4CFE - AAKB1_HUMAN -
8 PsiBlast_PDB 79.5796%-105 - C1 -4QFR - AAKB1_RAT -
21 Fugue 79.1298%-105 - C1 -4QFR - AAKB1_RAT -
10 PsiBlast_PDB 79.0096% -93 - C1 -5KQ5 - AAKB1_RAT -
6 PsiBlast_PDB 78.0997% -87 - C1 -5T5T - AAKB1_RAT -
11 PsiBlast_PDB 77.8796%-102 - C1 -5UFU - AAKB1_RAT -
9 PsiBlast_PDB 77.4496% -97 - C1 -4QFS - AAKB1_RAT -
30 HHSearch 72.3782% -36 - C1 -4RER 4.5 AAKB2_HUMAN
13 PsiBlast_PDB 72.1681% -36 - C1 -4RER 4.5 AAKB2_HUMAN
35 HHSearch 58.5798% -64 - C1 -1Z0N 5.8 AAKB1_RAT
15 PsiBlast_PDB 58.4096% -81 - C1 -1Z0N 5.8 AAKB1_RAT
22 Fugue 58.3998% -81 - C1 -1Z0N 5.8 AAKB1_RAT
39 HHSearch 57.8695% -72 * C1 *4YEF 5.0 AAKB1_RAT
37 HHSearch 57.4980% -27 - C1 -2LU3 - AAKB2_RAT -
14 PsiBlast_PDB 57.0997% -76 - C1 -1Z0M 5.4 AAKB1_RAT
16 PsiBlast_PDB 55.6597% -73 - C1 -4YEF 5.0 AAKB1_RAT
36 HHSearch 53.6581% -30 - C1 -4Y0G 2.1 AAKB2_RAT