@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AAKG2_HUMAN: (2018-07-12 )
MGSAVMDTKKKKDVSSPGGSGGKKNASQKRRSLRVHIPDLSSFAMPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

J7V_E_4(2YA3)
AAKG1_RAT
[Raw transfer]




ATP_E_5(2V92)
AAKG1_RAT
[Raw transfer]




ADP_C_12(5UFU)
AAKG1_RAT
[Raw transfer]




ADP_E_4(2Y8L)
AAKG1_RAT
[Raw transfer]




ADP_C_13(4QFR)
AAKG1_RAT
[Raw transfer]




ATP_E_5(2V9J)
AAKG1_RAT
[Raw transfer]




ADP_C_12(5KQ5)
AAKG1_RAT
[Raw transfer]




ADP_C_13(4QFR)
AAKG1_RAT
[Raw transfer]




ADP_E_4(2Y8Q)
AAKG1_RAT
[Raw transfer]




ADP_C_12(5T5T)
AAKG1_RAT
[Raw transfer]




AMP_G_5(4REW)
AAKG1_HUMAN
[Raw transfer]




ADP_E_5(2Y8L)
AAKG1_RAT
[Raw transfer]




ATP_C_5(4EAK)
AAKG1_RAT
[Raw transfer]




J7V_E_5(2YA3)
AAKG1_RAT
[Raw transfer]




AMP_E_6(2V8Q)
AAKG1_RAT
[Raw transfer]




AMP_C_11(4QFS)
AAKG1_RAT
[Raw transfer]




AMP_E_6(2V8Q)
AAKG1_RAT
[Raw transfer]




AMP_G_7(4REW)
AAKG1_HUMAN
[Raw transfer]




AMP_G_6(4REW)
AAKG1_HUMAN
[Raw transfer]




AMP_E_4(2V8Q)
AAKG1_RAT
[Raw transfer]




AMP_C_9(4QFG)
AAKG1_RAT
[Raw transfer]




AMP_E_7(4CFH)
AAKG1_RAT
[Raw transfer]




AMP_C_5(4EAL)
AAKG1_RAT
[Raw transfer]




AMP_A_2(2UV4)

[Raw transfer]




3 PsiBlast_PDB 96.5675%-200 - C1 -5ISO - AAKG1_HUMAN -
4 PsiBlast_PDB 96.2275%-204 - C1 -4ZHX - AAKG1_HUMAN -
11 PsiBlast_PDB 95.4375%-198 - C1 -2YA3 11.4 AAKG1_RAT
22 HHSearch 94.9577%-195 - C1 -4REW 5.9 AAKG1_HUMAN
20 PsiBlast_PDB 94.8975%-202 - C1 -5UFU 6.4 AAKG1_RAT
9 PsiBlast_PDB 94.5475%-196 - C1 -2Y8L 7.0 AAKG1_RAT
14 PsiBlast_PDB 93.9175%-198 - C1 -4CFH 6.6 AAKG1_RAT
5 PsiBlast_PDB 93.9175%-194 - C1 -5EZV - AAKG1_HUMAN -
8 PsiBlast_PDB 93.3575%-189 - C1 -2V9J 5.8 AAKG1_RAT
44 Fugue 93.2576%-186 * C1 *2V8Q 6.5 AAKG1_RAT
7 PsiBlast_PDB 93.2375%-189 - C1 -2V92 7.5 AAKG1_RAT
2 PsiBlast_PDB 93.2375%-188 - C1 -4CFF - AAKG1_HUMAN -
10 PsiBlast_PDB 92.9075%-184 - C1 -2Y8Q 6.3 AAKG1_RAT
21 HHSearch 92.8876%-188 - C1 -2V8Q 6.5 AAKG1_RAT
6 PsiBlast_PDB 92.5875%-186 - C1 -2V8Q 7.7 AAKG1_RAT
15 PsiBlast_PDB 92.4675%-203 - C1 -4QFG 4.6 AAKG1_RAT
42 Fugue 92.2078%-202 - C1 -4QFR 5.8 AAKG1_RAT
19 PsiBlast_PDB 91.8075%-200 - C1 -5T5T 6.8 AAKG1_RAT
13 PsiBlast_PDB 91.6675%-194 - C1 -4EAL 5.0 AAKG1_RAT
16 PsiBlast_PDB 91.4275%-202 - C1 -4QFR 5.8 AAKG1_RAT
12 PsiBlast_PDB 90.8775%-190 - C1 -4EAK 5.8 AAKG1_RAT
18 PsiBlast_PDB 90.7775%-203 - C1 -5KQ5 6.6 AAKG1_RAT
17 PsiBlast_PDB 86.2675%-209 - C1 -4QFS 3.9 AAKG1_RAT
45 Fugue 56.2769%-165 - C1 -2UV4 5.6