@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : BCKD_HUMAN: (2018-07-12 )
MILASVLRSGPGGGLPLRPLLGPALALRARSTSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKSARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESFRI

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(4DZY)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H7Q)
BCKD_RAT
[Raw transfer]




ADP_A_2(4E00)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H85)
BCKD_RAT
[Raw transfer]




ADP_A_2(3TZ5)
BCKD_RAT
[Raw transfer]




ADP_A_2(3VAD)
BCKD_RAT
[Raw transfer]




ANP_A_5(4E01)
BCKD_RAT
[Raw transfer]




ANP_A_5(4E01)
BCKD_RAT
[Raw transfer]




ADP_A_2(4H81)
BCKD_RAT
[Raw transfer]




ADP_A_2(3TZ4)
BCKD_RAT
[Raw transfer]




ANP_A_2(4E02)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




SAP_A_9(1GJV)
BCKD_RAT
[Raw transfer]




ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]




ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]




ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]




7F9_A_3(5M4K)
PDK2_HUMAN
[Raw transfer]




SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]




P35_A_3(5J71)
PDK2_HUMAN
[Raw transfer]




7 PsiBlast_PDB 97.2395%-152 - C1 -4E00 6.5 BCKD_RAT
32 HHSearch 96.9098%-137 - C1 -1GKZ 6.2 BCKD_RAT
15 PsiBlast_PDB 96.9098%-137 - C1 -1GKZ 6.2 BCKD_RAT
21 Fugue 96.8698%-137 - C1 -1GKZ 6.2 BCKD_RAT
31 HHSearch 96.5195%-154 - C1 -4E01 8.0 BCKD_RAT
8 PsiBlast_PDB 96.5195%-154 - C1 -4E01 8.0 BCKD_RAT
5 PsiBlast_PDB 96.3395%-152 - C1 -4E02 7.9 BCKD_RAT
3 PsiBlast_PDB 96.1895%-148 - C1 -3TZ4 6.8 BCKD_RAT
14 PsiBlast_PDB 96.1798%-148 - C1 -1GKX - BCKD_RAT -
11 PsiBlast_PDB 96.0795%-154 - C1 -4H85 7.2 BCKD_RAT
10 PsiBlast_PDB 96.0695%-154 - C1 -4H81 7.1 BCKD_RAT
13 PsiBlast_PDB 95.8798%-137 - C1 -1GJV 7.0 BCKD_RAT
4 PsiBlast_PDB 95.6395%-141 - C1 -3TZ5 7.5 BCKD_RAT
6 PsiBlast_PDB 95.2895%-147 - C1 -4DZY 6.8 BCKD_RAT
1 PsiBlast_PDB 95.2895%-154 - C1 -3TZ0 - BCKD_RAT -
2 PsiBlast_PDB 95.0195%-151 - C1 -3TZ2 - BCKD_RAT -
12 PsiBlast_PDB 94.9395%-147 - C1 -3VAD 7.2 BCKD_RAT
9 PsiBlast_PDB 94.6995%-152 - C1 -4H7Q 6.6 BCKD_RAT
34 HHSearch 65.4131% -27 - C1 -5J71 5.8 PDK2_HUMAN
33 HHSearch 63.3532% -19 * C1 *3CRL 5.3 PDK2_RAT
22 Fugue 60.5231% -4 - C1 -1JM6 6.2 PDK2_RAT
16 PsiBlast_PDB 58.4532% -43 - C1 -1JM6 6.2 PDK2_RAT
19 PsiBlast_PDB 56.6232% -48 - C1 -4V25 5.8 PDK2_HUMAN
20 PsiBlast_PDB 55.7932% -41 - C1 -5M4K 5.2 PDK2_HUMAN
18 PsiBlast_PDB 54.2132% -49 - C1 -3CRL 5.3 PDK2_RAT