@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GRP75_HUMAN: (2018-07-13 )
MISASRAAAARLVGAAASRGPTAARHQDSWNGLSHEAFRLVSRRDYASEAIKGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKVIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLRHIVKEFKRETGVDLTKDNMALQRVREAAEKAKCELSSSVQTDINLPYLTMDSSGPKHLNMKLTRAQFEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKMEEFKDQLPADECNKLKEEISKMRELLARKDSETGENIRQAASSLQQASLKLFEMAYKKMASEREGSGSSGTGEQKEDQKEEKQ

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(2V7Y)
DNAK_GEOKA
[Raw transfer]




ATP_B_5(5TKY)
SSB1_CHATD
[Raw transfer]




ADP_A_2(2V7Y)
DNAK_GEOKA
[Raw transfer]




ATP_A_4(4JN4)
DNAK_ECOLI
[Raw transfer]




ATP_A_4(4JNE)
DNAK_ECOLI
[Raw transfer]




ADP_A_7(1QQM)
HSP7C_BOVIN
[Raw transfer]




ATP_A_3(5NRO)
DNAK_ECOLI
[Raw transfer]




ADP_A_4(6EOE)
BIP_CRIGR
[Raw transfer]




ATP_A_3(5TKY)
SSB1_CHATD
[Raw transfer]




ADP_A_2(6EOF)
BIP_CRIGR
[Raw transfer]




ATP_B_13(4JNE)
DNAK_ECOLI
[Raw transfer]




ATP_A_3(5TKY)
SSB1_CHATD
[Raw transfer]




ADP_A_2(6EOF)
BIP_CRIGR
[Raw transfer]




ADP_A_5(2V7Z)
HSP7C_RAT
[Raw transfer]




ADP_A_3(3I33)
HSP72_HUMAN
[Raw transfer]




ATP_B_22(6ASY)
BIP_HUMAN
[Raw transfer]




ATP_A_8(6ASY)
BIP_HUMAN
[Raw transfer]




ADP_A_2(4J8F)
F10A1_RAT
[Raw transfer]




ADP_B_14(3C7N)
HSP7C_BOVIN
[Raw transfer]




DTP_A_5(5F0X)
BIP_HUMAN
[Raw transfer]




TMO_A_2(4FL9)
HSP7C_BOVIN
[Raw transfer]




40 HHSearch 86.4865% -67 * C2 *2V7Y 7.8 DNAK_GEOKA
6 PsiBlast_PDB 85.7162% -71 - C2 -2V7Y 7.8 DNAK_GEOKA
32 HHSearch 84.5262% 19 - C2 -4JNE 9.7 DNAK_ECOLI
3 PsiBlast_PDB 83.8461% 18 - C2 -4JN4 9.6 DNAK_ECOLI
31 HHSearch 83.6062% 19 - C2 -4B9Q - DNAK_ECOLI -
4 PsiBlast_PDB 83.2661% 19 - C2 -4JNE 9.5 DNAK_ECOLI
5 PsiBlast_PDB 83.2460% 19 - C2 -4B9Q - DNAK_ECOLI -
2 PsiBlast_PDB 82.4361% 18 - C2 -5NRO 9.8 DNAK_ECOLI
1 PsiBlast_PDB 78.3361% 21 - C2 -2KHO - DNAK_ECOLI -
20 PsiBlast_PDB 75.7946% 21 - C2 -5TKY 8.2 SSB1_CHATD
19 PsiBlast_PDB 75.4165% -80 - C2 -1DKG - DNAK_ECOLI -
34 HHSearch 74.6746% 18 - C2 -5TKY 8.1 SSB1_CHATD
8 PsiBlast_PDB 74.4556% 19 - C2 -6ASY 9.1 BIP_HUMAN
36 HHSearch 74.0452% 42 - C2 -6ASY 9.5 BIP_HUMAN
33 HHSearch 74.0146% 19 - C2 -5TKY 8.6 SSB1_CHATD
10 PsiBlast_PDB 73.9054% 18 - C2 -5E84 - BIP_HUMAN -
12 PsiBlast_PDB 73.2955% 23 - C2 -4FL9 2.9 HSP7C_BOVIN
11 PsiBlast_PDB 73.0255% 11 - C2 -1YUW - HSP7C_BOVIN -
16 PsiBlast_PDB 72.9457% 18 - C2 -6EOE 7.2 BIP_CRIGR
15 PsiBlast_PDB 72.4857% 21 - C2 -6EOC - BIP_CRIGR -
17 PsiBlast_PDB 72.4257% 22 - C2 -6EOF 7.2 BIP_CRIGR
43 HHSearch 70.7258% 36 - C2 -6EOF 7.2 BIP_CRIGR
9 PsiBlast_PDB 70.6355% 18 - C2 -3C7N 5.5 HSP7C_BOVIN
44 HHSearch 61.7252% -14 - C2 -4J8F 6.5 F10A1_RAT (first)
48 HHSearch 60.4853% -9 - C2 -1QQM 6.9 HSP7C_BOVIN
51 HHSearch 60.1053% -2 - C2 -3I33 7.7 HSP72_HUMAN
13 PsiBlast_PDB 59.1455% -4 - C2 -2V7Z 5.6 HSP7C_RAT
45 HHSearch 58.0655% 23 - C2 -5F0X 5.9 BIP_HUMAN