@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : HSP7C_HUMAN: (2018-07-13 )
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_7(2QWN)
HSP7C_BOVIN
[Raw transfer]




ADP_A_4(1NGB)
HSP7C_BOVIN
[Raw transfer]




ADP_A_2(4J8F)
F10A1_RAT
[Raw transfer]




ANP_A_3(1NGJ)
HSP7C_BOVIN
[Raw transfer]




ADP_A_11(2QWM)
HSP7C_BOVIN
[Raw transfer]




ADP_A_7(1QQM)
HSP7C_BOVIN
[Raw transfer]




ADP_A_8(1HPM)
HSP7C_BOVIN
[Raw transfer]




ADP_A_7(2QWP)
HSP7C_BOVIN
[Raw transfer]




ADP_A_7(2QWO)
HSP7C_BOVIN
[Raw transfer]




ATP_A_8(6ASY)
BIP_HUMAN
[Raw transfer]




ADP_A_6(3HSC)
HSP7C_BOVIN
[Raw transfer]




ATP_B_5(5TKY)
SSB1_CHATD
[Raw transfer]




ANP_A_3(1NGI)
HSP7C_BOVIN
[Raw transfer]




ATP_B_22(6ASY)
BIP_HUMAN
[Raw transfer]




ADP_A_4(2QWQ)
HSP7C_BOVIN
[Raw transfer]




ADP_A_8(1BUP)
HSP7C_BOVIN
[Raw transfer]




ANP_A_3(2QWR)
HSP7C_BOVIN
[Raw transfer]




ATP_A_3(5TKY)
SSB1_CHATD
[Raw transfer]




ADP_A_9(2QWL)
HSP7C_BOVIN
[Raw transfer]




ADP_A_5(2V7Z)
HSP7C_RAT
[Raw transfer]




ADP_B_14(3C7N)
HSP7C_BOVIN
[Raw transfer]




DTP_A_5(5F0X)
BIP_HUMAN
[Raw transfer]




TMO_A_2(4FL9)
HSP7C_BOVIN
[Raw transfer]




3 PsiBlast_PDB 92.1199% -64 - C1 -4FL9 3.0 HSP7C_BOVIN
39 HHSearch 89.89100% -57 - C1 -1YUW - HSP7C_BOVIN -
2 PsiBlast_PDB 89.6899% -57 - C1 -1YUW - HSP7C_BOVIN -
1 PsiBlast_PDB 89.61100% -64 - C1 -3C7N 5.1 HSP7C_BOVIN
15 PsiBlast_PDB 82.28100% -86 - C1 -1HPM 8.4 HSP7C_BOVIN
11 PsiBlast_PDB 81.7799% -87 - C1 -2QWQ 7.6 HSP7C_BOVIN
6 PsiBlast_PDB 81.57100% -83 - C1 -2QWL 8.0 HSP7C_BOVIN
12 PsiBlast_PDB 81.5699% -85 - C1 -2QWR 8.0 HSP7C_BOVIN
17 PsiBlast_PDB 81.29100% -77 - C1 -1NGJ 9.2 HSP7C_BOVIN
45 HHSearch 81.2098% -84 - C1 -1QQM 7.6 HSP7C_BOVIN
5 PsiBlast_PDB 81.16100% -77 - C1 -2QW9 - HSP7C_BOVIN -
19 PsiBlast_PDB 81.1099% -84 - C1 -1BUP 8.2 HSP7C_BOVIN
4 PsiBlast_PDB 81.0099% -86 - C1 -2V7Z 5.9 HSP7C_RAT
18 PsiBlast_PDB 80.93100% -77 - C1 -3HSC 7.7 HSP7C_BOVIN
7 PsiBlast_PDB 80.78100% -80 - C1 -2QWM 7.9 HSP7C_BOVIN
10 PsiBlast_PDB 80.6999% -84 - C1 -2QWP 8.1 HSP7C_BOVIN
16 PsiBlast_PDB 80.66100% -84 - C1 -1NGI 9.5 HSP7C_BOVIN
8 PsiBlast_PDB 80.6499% -84 - C1 -2QWN 8.2 HSP7C_BOVIN
20 PsiBlast_PDB 80.4799% -86 - C1 -1NGB 7.8 HSP7C_BOVIN
9 PsiBlast_PDB 80.1799% -78 - C1 -2QWO 8.2 HSP7C_BOVIN
44 HHSearch 80.0688% -92 - C1 -4J8F 7.4 F10A1_RAT (first)
34 HHSearch 77.9566% 34 - C1 -6ASY 9.6 BIP_HUMAN
33 HHSearch 77.6658% 2 - C1 -5TKY 8.8 SSB1_CHATD
13 PsiBlast_PDB 77.0665% 34 - C1 -6ASY 9.6 BIP_HUMAN