@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KI21B_HUMAN: (2018-07-13 )
MAGQGDCCVKVAVRIRPQLSKEKIEGCHICTSVTPGEPQVLLGKDKAFTYDFVFDLDTWQEQIYSTCVSKLIEGCFEGYNATVLAYGQTGAGKTYTMGTGFDMATSEEEQGIIPRAIAHLFGGIAERKRRAQEQGVAGPEFKVSAQFLELYNEEILDLFDSTRDPDTRHRRSNIKIHEDANGGIYTTGVTSRLIHSQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRMCTQPDLVNEAVTGLPDGTPPSSEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANRARNIKNKVVVNQDKTSQQISALRAEIARLQMELMEYKAGKRVIGEDGAEGYSDLFRENAMLQKENGALRLRVKAMQEAIDAINNRVTQLMSQEANLLLAKAGDGNEAIGALIQNYIREIEELRTKLLESEAMNESLRRSLSRASARSPYSLGASPAAPAFGGSPASSMEDASEVIRRAKQDLERLKKKEVRQRRKSPEKEAFKKRAKLQQENSEETDENEAEEEEEERDESGCEEEEGREDEDEDSGSEESLVDSDSDPEEKEVNFQADLADLTCEIEIKQKLIDELENSQRRLQTLKHQYEEKLILLQNKIRDTQLERDRVLQNLSTMECYTEEKANKIKADYEKRLREMNRDLQKLQAAQKEHARLLKNQSRYERELKKLQAEVAEMKKAKVALMKQMREEQQRRRLVETKRNREIAQLKKEQRRQEFQIRALESQKRQQEMVLRRKTQEVSALRRLAKPMSERVAGRAGLKPPMLDSGAEVSASTTSSEAESGARSVSSIVRQWNRKINHFLGDHPAPTVNGTRPARKKFQKKGASQSFSKAARLKWQSLERRIIDIVMQRMTIVNLEADMERLIKKREELFLLQEALRRKRERLQAESPEEEKGLQELAEEIEVLAANIDYINDGITDCQATIVQLEETKEELDSTDTSVVISSCSLAEARLLLDNFLKASIDKGLQVAQKEAQIRLLEGRLRQTDMAGSSQNHLLLDALREKAEAHPELQALIYNVQQENGYASTDEEISEFSEGSFSQSFTMKGSTSHDDFKFKSEPKLSAQMKAVSAECLGPPLDISTKNITKSLASLVEIKEDGVGFSVRDPYYRDRVSRTVSLPTRGSTFPRQSRATETSPLTRRKSYDRGQPIRSTDVGFTPPSSPPTRPRNDRNVFSRLTSNQSQGSALDKSDDSDSSLSEVLRGIISPVGGAKGARTAPLQCVSMAEGHTKPILCLDATDELLFTGSKDRSCKMWNLVTGQEIAALKGHPNNVVSIKYCSHSGLVFSVSTSYIKVWDIRDSAKCIRTLTSSGQVISGDACAATSTRAITSAQGEHQINQIALSPSGTMLYAASGNAVRIWELSRFQPVGKLTGHIGPVMCLTVTQTASQHDLVVTGSKDHYVKMFELGECVTGTIGPTHNFEPPHYDGIECLAIQGDILFSGSRDNGIKKWDLDQQELIQQIPNAHKDWVCALAFIPGRPMLLSACRAGVIKVWNVDNFTPIGEIKGHDSPINAICTNAKHIFTASSDCRVKLWNYVPGLTPCLPRRVLAIKGRATTLP

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(3ZFC)
KIF4_MOUSE
[Raw transfer]




ANP_A_3(3ZFD)
KIF4_MOUSE
[Raw transfer]




ATP_K_4(3J8Y)
KINH_HUMAN
[Raw transfer]




ANP_A_3(3DCB)
NOD_DROME
[Raw transfer]




ANP_K_5(5OCU)
KI18A_HUMAN
[Raw transfer]




ANP_K_5(5OCU)
KI18A_HUMAN
[Raw transfer]




ADP_A_2(5GSZ)
KIF19_MOUSE
[Raw transfer]




ADP_B_5(2VVG)
?
[Raw transfer]




ADP_A_5(3B6U)
KIF3B_HUMAN
[Raw transfer]




ADP_A_2(5WDH)
KIFC1_HUMAN
[Raw transfer]




ADP_A_4(3L1C)
NCD_DROME
[Raw transfer]




ADP_B_6(3LRE)
KI18A_HUMAN
[Raw transfer]




ADP_A_2(2XT3)
KIF7_HUMAN
[Raw transfer]




ADP_A_3(2VVG)
?
[Raw transfer]




ADP_A_5(1MKJ)
KINH_HUMAN
[Raw transfer]




ADP_A_4(4BN2)
KIF15_HUMAN
[Raw transfer]




ADP_A_3(3X2T)
KIF5C_MOUSE
[Raw transfer]




ANP_C_8(4AQV)
KIF11_HUMAN
[Raw transfer]




ADP_C_10(4CK7)
KIF11_HUMAN
[Raw transfer]




ANP_C_9(5M5I)
CUT7_SCHPO
[Raw transfer]




ANP_C_12(4UY0)
KIF5A_HUMAN
[Raw transfer]




3 PsiBlast_PDB 88.0645% -58 - C2 -2XT3 7.5 KIF7_HUMAN
2 PsiBlast_PDB 85.6452% -4 - C2 -3ZFD 10.2 KIF4_MOUSE
1 PsiBlast_PDB 85.6252% -4 - C2 -3ZFC 10.0 KIF4_MOUSE
40 HHSearch 82.9735% -62 - C2 -3DCB 7.9 NOD_DROME
9 PsiBlast_PDB 82.5337% -47 - C2 -4ATX - KINH_RAT -
41 HHSearch 80.5340% - - C2 -4CK7 4.3 KIF11_HUMAN
25 HHSearch 80.3339% - - C2 -5M5I 2.3 CUT7_SCHPO
8 PsiBlast_PDB 80.0537% -43 - C2 -1MKJ 6.8 KINH_HUMAN
18 PsiBlast_PDB 79.9237% -22 - C2 -4HNA - KINH_HUMAN -
7 PsiBlast_PDB 79.6437% -43 - C2 -2VVG 7.1 ?
10 PsiBlast_PDB 79.0837% -42 - C2 -3J8X - KINH_HUMAN -
39 HHSearch 78.9935% -62 - C2 -3DC4 - NOD_DROME -
11 PsiBlast_PDB 78.7737% -21 - C2 -3J8Y 8.9 KINH_HUMAN
5 PsiBlast_PDB 78.6138% -40 - C2 -3X2T 6.2 KIF5C_MOUSE
33 HHSearch 78.1043% -4 - C2 -2VVG 6.9 ?
19 PsiBlast_PDB 76.5137% - - C2 -4AQV 2.1 KIF11_HUMAN
20 PsiBlast_PDB 76.3437% - - C2 -4AQW - KIF11_HUMAN -
6 PsiBlast_PDB 75.9941% 3 - C2 -4BN2 6.7 KIF15_HUMAN
4 PsiBlast_PDB 73.5241% 34 - C2 -3B6U 7.3 KIF3B_HUMAN
31 HHSearch 73.1638% -16 - C2 -3U06 - NCD_DROME -
14 PsiBlast_PDB 72.6937% - - C2 -4UY0 2.7 KIF5A_HUMAN
43 HHSearch 71.6644% 14 * C2 *3LRE 7.2 KI18A_HUMAN
38 HHSearch 71.5643% 23 - C2 -5OCU 5.1 KI18A_HUMAN
26 HHSearch 70.6642% 13 - C2 -5GSZ 6.6 KIF19_MOUSE
34 HHSearch 67.9438% 16 - C2 -3L1C 6.7 NCD_DROME
28 HHSearch 66.0432% 18 - C2 -5WDH 8.6 KIFC1_HUMAN
16 PsiBlast_PDB 62.7737% 39 - C2 -5OCU 5.0 KI18A_HUMAN