@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PLK1_HUMAN: (2018-07-13 )
MSAAVTAGKLARAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEEPVVRETGEVVDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

664_A_4(4A4O)
PLK1_HUMAN
[Raw transfer]




R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]




939_A_4(4A4L)
PLK1_HUMAN
[Raw transfer]




R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]




626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]




2FR_A_2(3DBC)
?
[Raw transfer]




IBI_A_2(3FC2)
PLK1_HUMAN
[Raw transfer]




937_A_2(2YAC)
PLK1_HUMAN
[Raw transfer]




1J4_A_4(4J53)
PLK1_HUMAN
[Raw transfer]




79D_A_2(5TA6)
PLK1_HUMAN
[Raw transfer]




1J3_A_2(4J52)
PLK1_HUMAN
[Raw transfer]




626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]




3FR_A_2(3DBD)
?
[Raw transfer]




9ZP_A_2(4B6L)
PLK3_HUMAN
[Raw transfer]




79C_A_3(5TA8)
PLK1_HUMAN
[Raw transfer]




ADP_A_2(3D5W)
?
[Raw transfer]




1FR_A_2(3DB8)
?
[Raw transfer]




ANP_A_7(2OU7)
PLK1_HUMAN
[Raw transfer]




1D1_A_2(4I5P)
PLK2_HUMAN
[Raw transfer]




EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




4 PsiBlast_PDB 95.6299%-134 - C1 -2OU7 3.5 PLK1_HUMAN
27 HHSearch 95.33100%-136 - C1 -2OWB 8.2 PLK1_HUMAN
6 PsiBlast_PDB 95.2599%-134 - C1 -3FC2 8.4 PLK1_HUMAN
12 PsiBlast_PDB 95.1099%-136 - C1 -4J52 9.9 PLK1_HUMAN
5 PsiBlast_PDB 95.0399%-136 - C1 -2OWB 8.2 PLK1_HUMAN
11 PsiBlast_PDB 95.0199%-133 - C1 -2RKU 9.8 PLK1_HUMAN
13 PsiBlast_PDB 95.0099%-133 - C1 -4J53 9.1 PLK1_HUMAN
3 PsiBlast_PDB 94.9899%-132 - C1 -5TA8 8.9 PLK1_HUMAN
8 PsiBlast_PDB 94.30100%-131 - C1 -2YAC 9.3 PLK1_HUMAN
2 PsiBlast_PDB 94.2899%-127 - C1 -5TA6 10.6 PLK1_HUMAN
1 PsiBlast_PDB 94.0899%-140 - C1 -3THB - PLK1_HUMAN -
9 PsiBlast_PDB 93.71100%-131 - C1 -4A4L 9.1 PLK1_HUMAN
28 HHSearch 93.52100%-135 - C1 -2RKU 9.8 PLK1_HUMAN
10 PsiBlast_PDB 93.28100%-127 - C1 -4A4O 9.4 PLK1_HUMAN
7 PsiBlast_PDB 91.9299%-131 - C1 -2V5Q - PLK1_HUMAN -
15 PsiBlast_PDB 84.7277%-119 - C1 -3D5U - ? -
20 PsiBlast_PDB 84.1376%-121 - C1 -3D5W 6.1 ?
17 PsiBlast_PDB 81.8276%-136 - C1 -3DB8 7.6 ?
16 PsiBlast_PDB 81.7476%-139 - C1 -3D5V - ? -
19 PsiBlast_PDB 81.4976%-138 - C1 -3DBD 8.6 ?
18 PsiBlast_PDB 80.1376%-133 - C1 -3DBC 7.5 ?
29 HHSearch 76.6052%-126 - C1 -4I5P 6.8 PLK2_HUMAN
30 HHSearch 76.1654%-122 - C1 -4B6L 10.4 PLK3_HUMAN