@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PP2BA_HUMAN: (2018-07-13 )
MSEPKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNICSDDELGSEEDGFDGATAAARKEVIRNKIRAIGKMARVFSVLREESESVLTLKGLTPTGMLPSGVLSGGKQTLQSATVEAIEADEAIKGFSPQHKITSFEEAKGLDRINERMPPRRDAMPSDANLNSINKALTSETNGTDSNGSNSSNIQ

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_C_7(4LAC)
PP2AA_HUMAN
[Raw transfer]



GOL_A_6(4F0Z)
PP2BA_HUMAN
[Raw transfer]



OKA_A_4(1U32)
PP1G_HUMAN
[Raw transfer]



OKA_A_4(1U32)
PP1G_HUMAN
[Raw transfer]



GOL_A_6(5INB)
PP1G_HUMAN
[Raw transfer]



4TE_A_4(4ZX2)
PPP5_HUMAN
[Raw transfer]



BME_A_7(1U32)
PP1G_HUMAN
[Raw transfer]



BME_A_5(1U32)
PP1G_HUMAN
[Raw transfer]
8 PsiBlast_PDB 92.44100%-126 - C2 -1M63 - PP2BA_HUMAN -
22 HHSearch 92.3084%-123 - C2 -4OR9 - PP2BB_HUMAN -
6 PsiBlast_PDB 92.1499%-129 - C2 -1TCO - PP2BA_BOVIN -
3 PsiBlast_PDB 91.9985%-124 - C2 -4OR9 - PP2BB_HUMAN -
2 PsiBlast_PDB 91.9297%-123 - C2 -4ORB - PP2BA_MOUSE -
9 PsiBlast_PDB 91.71100%-128 - C2 -5SVE - PP2BA_HUMAN -
21 HHSearch 91.60100%-117 - C2 -1AUI - PP2BA_HUMAN -
1 PsiBlast_PDB 91.60100%-117 - C2 -1AUI - PP2BA_HUMAN -
24 HHSearch 91.50100%-128 - C2 -3LL8 - PP2BA_HUMAN -
5 PsiBlast_PDB 91.49100%-129 - C2 -2P6B - PP2BA_HUMAN -
7 PsiBlast_PDB 91.47100%-135 - C2 -1MF8 - PP2BA_HUMAN -
11 PsiBlast_PDB 91.43100%-128 - C2 -3LL8 - PP2BA_HUMAN -
23 HHSearch 91.23100%-128 - C2 -4F0Z 2.8 PP2BA_HUMAN
10 PsiBlast_PDB 91.23100%-128 - C2 -4F0Z - PP2BA_HUMAN -
42 Fugue 90.5197%-116 - C2 -1AUI - PP2BA_HUMAN -
4 PsiBlast_PDB 90.2785%-131 - C2 -4ORC - PP2BB_HUMAN -
43 Fugue 89.6899%-132 - C2 -1TCO - PP2BA_BOVIN -
13 PsiBlast_PDB 89.26100%-122 - C2 -2JOG - PP2BA_HUMAN -
12 PsiBlast_PDB 88.4999%-131 - C2 -5C1V - PP2BA_HUMAN -
14 PsiBlast_PDB 74.3172% -35 - C2 -5B8I - ? -
35 HHSearch 65.8741%-143 - C2 -5INB 2.4 PP1G_HUMAN
32 HHSearch 65.8443%-137 - C2 -1U32 9.2 PP1G_HUMAN
15 PsiBlast_PDB 64.9141%-131 - C2 -1U32 9.0 PP1G_HUMAN
19 PsiBlast_PDB 58.8943% -73 - C2 -4LAC 3.7 PP2AA_HUMAN
28 HHSearch 50.4339% 0 - C2 -4ZX2 3.9 PPP5_HUMAN