@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A8K2M8_HUMAN: (2017-05-31 )
WYHGLLSRQKAEALLQQNGDFLVRASGSRGGNPVISCRWRGSALHFEVFRVALRPRPGRPTALFQLEDEQFPSIPALVHSY

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_E_5(1R1P)
GRAP2_MOUSE
[Raw transfer]

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140 HHSearch 78.1938%-162 - C2 -2KK6 - -
7 PsiBlast_PDB 77.2435%-168 - C2 -2KK6 - -
138 HHSearch 72.6234% 0 - C- -2HDV - SH2B1_MOUSE -
1 PsiBlast_PDB 70.4237%-163 - C2 -1TCE - -
137 HHSearch 70.3441% -8 - C2 -2EYZ - CRK_HUMAN -
146 HHSearch 69.9339% -32 - C2 -4EIH - -
133 HHSearch 69.9341% -11 - C2 -1JU5 - CRK_HUMAN -
135 HHSearch 69.5041% -21 - C2 -2DVJ - CRK_HUMAN -
3 PsiBlast_PDB 68.5138%-190 - C2 -1WQU - -
5 PsiBlast_PDB 68.5038%-171 - C2 -3BKB - -
150 HHSearch 67.9239%-146 - C- -1MIL - -
8 PsiBlast_PDB 67.5036% 0 - C- -4XEY - -
6 PsiBlast_PDB 66.9238%-178 - C2 -4E93 - -
25 PsiBlast_CBE 66.2938% -3 - C2 -1R1S - GRAP2_MOUSE -
4 PsiBlast_PDB 66.0138%-178 - C2 -2DCR - -
2 PsiBlast_PDB 65.4137%-142 - C- -1MIL - -
141 HHSearch 65.2939% -13 - C2 -1OPK - ABL1_MOUSE -
33 PsiBlast_CBE 65.0034% -12 - C2 -1JU5 - CRK_HUMAN -
26 PsiBlast_CBE 64.8738% -2 - C2 -1R1S - GRAP2_MOUSE -
31 PsiBlast_CBE 64.8238% 7 - C2 -1R1P - GRAP2_MOUSE -
143 HHSearch 63.0342% -3 - C2 -1R1P 7.0 GRAP2_MOUSE