@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B4DL02_HUMAN: (2017-06-01 )
WFHGKLSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYH

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(1TCE)

[Raw transfer]

-

CHAIN_M_6(3PQZ)
GRB7_HUMAN
[Raw transfer]

-

2 PsiBlast_PDB 90.5598%-156 - C1 -1TCE 3.3
227 HHSearch 83.40100%-129 - C- -1MIL - -
1 PsiBlast_PDB 83.40100%-129 - C- -1MIL - -
224 HHSearch 64.5240%-139 - C1 -2KK6 Calc...
3 PsiBlast_PDB 64.5240%-139 - C1 -2KK6 - -
6 PsiBlast_PDB 56.9038%-151 - C1 -4E93 - -
157 PsiBlast_CBE 56.4334% 35 - C1 -2HUW - GRB2_HUMAN -
142 PsiBlast_CBE 55.8034% 43 - C1 -3S8O - GRB2_HUMAN -
5 PsiBlast_PDB 55.6938%-141 - C1 -3BKB - -
127 PsiBlast_CBE 55.6834% 28 - C1 -3MXC - GRB2_HUMAN -
117 PsiBlast_CBE 55.5734% 33 - C1 -1CJ1 - GRB2_HUMAN -
101 PsiBlast_CBE 55.4834% 36 - C1 -3WA4 - GRB2_HUMAN -
118 PsiBlast_CBE 55.4634% 34 - C1 -1ZFP - GRB2_HUMAN -
141 PsiBlast_CBE 55.4534% 41 - C1 -4P9V - GRB2_HUMAN -
137 PsiBlast_CBE 55.3934% 30 - C1 -3N84 - GRB2_HUMAN -
146 PsiBlast_CBE 55.3334% 36 - C1 -3OV1 - GRB2_HUMAN -
98 PsiBlast_CBE 55.3334% 34 - C1 -1JYR - GRB2_HUMAN -
106 PsiBlast_CBE 55.2634% 33 - C1 -1CJ1 - GRB2_HUMAN -
136 PsiBlast_CBE 55.2334% 35 - C1 -3N84 - GRB2_HUMAN -
135 PsiBlast_CBE 55.1834% 35 - C1 -3N84 - GRB2_HUMAN -
238 HHSearch 48.6838% 23 - C1 -3PQZ 2.7 GRB7_HUMAN