@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B4DVK9_HUMAN: (2017-06-01 )
WYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVEFY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(2LNW)

[Raw transfer]

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171 HHSearch 90.35100%-154 - C3 -2CRH - -
3 PsiBlast_PDB 90.35100%-154 - C3 -2CRH - -
4 PsiBlast_PDB 86.41100%-151 - C3 -2ROR - -
2 PsiBlast_PDB 82.34100%-140 - C3 -2MC1 - -
1 PsiBlast_PDB 80.70100%-136 - C3 -2LCT - -
10 PsiBlast_PDB 70.5836%-121 - C3 -4EIH - -
167 HHSearch 69.7149%-136 - C3 -2LNW 3.0
5 PsiBlast_PDB 69.7149%-136 - C3 -2LNW - -
6 PsiBlast_PDB 66.7349%-149 - C3 -2LNX - VAV2_HUMAN -
176 HHSearch 66.4549%-127 - C3 -2DLZ - -
8 PsiBlast_PDB 66.4549%-127 - C3 -2DLZ - -
178 HHSearch 66.3636%-117 - C3 -4EIH - -
19 PsiBlast_PDB 65.9335% -79 - C3 -2ABL - ABL1_HUMAN -
9 PsiBlast_PDB 64.3136%-118 - C3 -2ECD - -
14 PsiBlast_PDB 63.7335% -92 - C3 -3UYO - -
169 HHSearch 63.6927%-189 * C3 *3US4 - -
15 PsiBlast_PDB 61.9635% -91 - C3 -5DC4 - -
16 PsiBlast_PDB 61.7735% -98 - C3 -5DC9 - -
12 PsiBlast_PDB 61.1735%-100 - C3 -5DC0 - ABL1_HUMAN -
24 PsiBlast_CBE 61.1235% -86 - C3 -2FO0 - ABL1_HUMAN -