@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : F5GY79_HUMAN: (2017-06-02 )
WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(2YU7)

[Raw transfer]

-

CHAIN_B_2(2RMX)

[Raw transfer]

-

GOL_A_9(4H34)
PTN11_HUMAN
[Raw transfer]




3 PsiBlast_PDB 86.39100% -95 - C2 -1X6C Calc...
5 PsiBlast_PDB 86.38100%-101 - C2 -2RMX 3.2
4 PsiBlast_PDB 85.72100% -98 - C2 -2YU7 3.4
1 PsiBlast_PDB 84.68100% -87 - C2 -3PS5 Calc... PTN6_HUMAN
2 PsiBlast_PDB 79.40100% -94 - C2 -2B3O Calc... PTN6_HUMAN
24 PsiBlast_CBE 70.0951%-131 - C2 -5EHR Calc... PTN11_HUMAN
258 HHSearch 69.8742%-154 - C2 -3US4 Calc...
13 PsiBlast_PDB 66.6351%-105 - C2 -4OHE Calc... PTN11_HUMAN
7 PsiBlast_PDB 66.0951% -90 - C2 -4NWF Calc... PTN11_HUMAN
8 PsiBlast_PDB 65.7951% -50 - C2 -5DF6 Calc...
16 PsiBlast_PDB 65.7851% -77 - C2 -4OHD Calc... PTN11_HUMAN
20 PsiBlast_PDB 65.4551% -70 - C2 -4OHH Calc... ?
10 PsiBlast_PDB 65.2751% -55 - C2 -2SHP Calc... PTN11_HUMAN
256 HHSearch 65.1437%-145 - C2 -1K9A Calc... CSK_RAT
9 PsiBlast_PDB 64.7551%-121 - C2 -4H34 2.8 PTN11_HUMAN
11 PsiBlast_PDB 64.5351%-119 - C2 -4H1O Calc... PTN11_HUMAN
19 PsiBlast_PDB 64.5151% -70 - C2 -5IBS Calc... PTN11_HUMAN
12 PsiBlast_PDB 63.3851% -41 - C2 -4DGP Calc... PTN11_HUMAN
14 PsiBlast_PDB 63.3151% -35 - C2 -4OHI Calc... PTN11_HUMAN
15 PsiBlast_PDB 63.1451% -31 - C2 -4DGX Calc... PTN11_HUMAN