@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q53EL0_HUMAN: (2017-06-03 )
WYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHF

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(2YU7)

[Raw transfer]

-

CHAIN_B_2(2RMX)

[Raw transfer]

-

GOL_A_9(4H34)
PTN11_HUMAN
[Raw transfer]




CHAIN_B_2(3WA4)
GRB2_HUMAN
[Raw transfer]

-

1 PsiBlast_PDB 91.58100%-141 - C3 -3PS5 Calc... PTN6_HUMAN
3 PsiBlast_PDB 91.38100%-143 - C3 -1X6C Calc...
5 PsiBlast_PDB 91.27100%-156 - C3 -2RMX 3.2
4 PsiBlast_PDB 91.09100%-150 - C3 -2YU7 3.4
2 PsiBlast_PDB 85.23100%-144 - C3 -2B3O Calc... PTN6_HUMAN
213 HHSearch 78.7243%-204 - C3 -3US4 Calc...
25 PsiBlast_CBE 78.5555%-176 - C3 -5EHR Calc... PTN11_HUMAN
7 PsiBlast_PDB 74.8655%-167 - C3 -4H1O Calc... PTN11_HUMAN
8 PsiBlast_PDB 74.7855%-154 - C3 -4OHE Calc... PTN11_HUMAN
18 PsiBlast_PDB 74.3555%-169 - C3 -4H34 2.8 PTN11_HUMAN
12 PsiBlast_PDB 71.3155% -44 - C3 -2SHP Calc... PTN11_HUMAN
11 PsiBlast_PDB 70.7355% -37 - C3 -5DF6 Calc...
14 PsiBlast_PDB 70.7055% -61 - C3 -4OHD Calc... PTN11_HUMAN
16 PsiBlast_PDB 70.6755% -59 - C3 -5IBS Calc... PTN11_HUMAN
29 PsiBlast_CBE 70.3138%-151 - C3 -1AYC - PTN11_MOUSE -
210 HHSearch 70.2241%-184 - C- -3EAZ - CSK_HUMAN -
225 HHSearch 70.0532%-126 - C3 -2YSX Calc... SHIP1_HUMAN
19 PsiBlast_PDB 69.7455% -56 - C3 -5I6V Calc... PTN11_HUMAN
26 PsiBlast_CBE 69.7255% -49 - C3 -5EHP Calc... PTN11_HUMAN
9 PsiBlast_PDB 69.6055% -68 - C3 -4NWF Calc... PTN11_HUMAN
221 HHSearch 65.2739% -96 * C3 *3WA4 4.5 GRB2_HUMAN