@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SHC3_HUMAN: (2017-06-04 )
WYQGEMSRKEAEGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIRTKDRVFDSISHLINHH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(1TCE)

[Raw transfer]

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2 PsiBlast_PDB 85.2965%-148 - C2 -1TCE 3.3
235 HHSearch 83.9165%-121 - C- -1MIL - -
1 PsiBlast_PDB 83.9165%-121 - C- -1MIL - -
234 HHSearch 64.0342%-137 - C2 -2KK6 - -
3 PsiBlast_PDB 63.6241%-137 - C2 -2KK6 - -
50 PsiBlast_CBE 62.4932% 39 - C2 -1JYQ - GRB2_HUMAN -
4 PsiBlast_PDB 62.2140% 42 - C2 -2RVF - ? -
48 PsiBlast_CBE 62.1432% 41 - C2 -1JYR - GRB2_HUMAN -
120 PsiBlast_CBE 62.0332% 41 - C2 -2HUW - GRB2_HUMAN -
110 PsiBlast_CBE 61.8532% 36 - C2 -1ZFP - GRB2_HUMAN -
54 PsiBlast_CBE 61.6540% 31 - C2 -2HDX - SH2B1_MOUSE -
5 PsiBlast_PDB 61.6434% 36 - C2 -2EO3 - CRKL_HUMAN -
101 PsiBlast_CBE 61.6332% 36 - C2 -3N84 - GRB2_HUMAN -
95 PsiBlast_CBE 61.6132% 44 - C2 -3N8M - GRB2_HUMAN -
56 PsiBlast_CBE 61.4840% 34 - C2 -2HDX - SH2B1_MOUSE -
117 PsiBlast_CBE 61.4132% 38 - C2 -3C7I - GRB2_HUMAN -
90 PsiBlast_CBE 61.3032% 48 - C2 -3S8O - GRB2_HUMAN -
242 HHSearch 61.2135% 30 - C2 -2EO3 - CRKL_HUMAN -
77 PsiBlast_CBE 61.1432% 38 - C2 -1BMB - GRB2_HUMAN -
100 PsiBlast_CBE 61.1032% 34 - C2 -3N84 - GRB2_HUMAN -