@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : STAT4_HUMAN: (2017-06-04 )
WIDGYVMGFVSKEKERLLLKDKMPGTFLLRFSESHLGGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_C_3(1YVL)
STAT1_HUMAN
[Raw transfer]

-

CHAIN_C_3(1YVL)
STAT1_HUMAN
[Raw transfer]

-

CHAIN_D_4(1YVL)
STAT1_HUMAN
[Raw transfer]

-

24 HHSearch 90.3666% -62 - C1 -1YVL 6.1 STAT1_HUMAN
2 PsiBlast_PDB 89.3764% -62 - C1 -1YVL 6.7 STAT1_HUMAN
26 HHSearch 80.7338%-139 - C1 -4Y5U - STAT6_HUMAN -
5 PsiBlast_PDB 79.6656% -54 - C1 -4E68 - STAT3_MOUSE -
22 HHSearch 79.1057% -48 - C1 -1BG1 - STAT3_MOUSE -
21 PsiBlast_CBE 78.7364% 3 - C1 -1YVL 6.2 STAT1_HUMAN
4 PsiBlast_PDB 78.6456% -48 - C1 -1BG1 - STAT3_MOUSE -
6 PsiBlast_PDB 77.4038%-148 - C1 -5D39 - STAT6_HUMAN -
7 PsiBlast_PDB 77.3938%-132 - C1 -4Y5U - STAT6_HUMAN -
8 PsiBlast_PDB 77.3538%-158 - C1 -4Y5W - STAT6_HUMAN -
1 PsiBlast_PDB 74.3264% 8 - C1 -1BF5 - STAT1_HUMAN -
23 HHSearch 73.7066% 7 - C1 -1BF5 - STAT1_HUMAN -
25 HHSearch 71.3241%-134 - C1 -1Y1U - STA5A_MOUSE -
9 PsiBlast_PDB 67.0240%-115 - C1 -1Y1U - STA5A_MOUSE -
11 PsiBlast_PDB 65.8024%-145 - C1 -1UUS - STATA_DICDI -
10 PsiBlast_PDB 64.8024%-146 - C1 -1UUR - STATA_DICDI -
3 PsiBlast_PDB 63.8956% -51 - C1 -3CWG - STAT3_MOUSE -
27 HHSearch 61.3324%-143 - C1 -1UUR - STATA_DICDI -
44 Fugue 61.2927%-105 - C1 -2CBL - CBL_HUMAN -
40 HHSearch 52.0421% -56 - C1 -2LQN - CRKL_HUMAN -