@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0004: (2017-12-13 )
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPLADIDTINLELILADLESVNKRYARVEKMARTQKDKESVAEFNVLQKIKPVLEDGKSARTIEFTDEEQKVVKGLFLLTTKPVLYVANVDEDVVSEPDSIDYVKQIREFAATENAEVVVISARAEEEISELDDEDKKEFLEAIGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGMKAPQAAGIIHSDFEKGFIRAVTMSYEDLVKYGSEKAVKEAGRLREEGKEYIVQDGDIMEFRFNV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_A_2(2DBY)
?
[Raw transfer]



GDP_A_2(2DBY)
?
[Raw transfer]



ANP_B_9(5EE3)
OLA1_ORYSJ
[Raw transfer]



ANP_A_3(5EE3)
OLA1_ORYSJ
[Raw transfer]



GNP_A_3(5EE9)
OLA1_ORYSJ
[Raw transfer]



GDP_A_6(2E87)
?
[Raw transfer]



G4P_B_10(1LNZ)
OBG_BACSU
[Raw transfer]



GOL_B_6(5EE9)
OLA1_ORYSJ
[Raw transfer]
74 HHSearch 91.0157%-107 - C5 -1JAL - YCHF_HAEIN -
1 PsiBlast_PDB 90.3855%-109 - C5 -1JAL - YCHF_HAEIN -
76 HHSearch 80.1653% -2 - C5 -2DBY 8.2 ?
4 PsiBlast_PDB 78.9942% -65 - C5 -5EE1 - OLA1_ORYSJ -
21 PsiBlast_CBE 78.0642% -67 - C5 -5EE9 2.5 OLA1_ORYSJ
22 PsiBlast_CBE 77.8442% -69 - C5 -5EE3 6.8 OLA1_ORYSJ
5 PsiBlast_PDB 77.5842% -67 - C5 -5EE3 6.4 OLA1_ORYSJ
6 PsiBlast_PDB 76.9642% -64 - C5 -5EE9 5.8 OLA1_ORYSJ
3 PsiBlast_PDB 75.7052% 29 - C5 -2DBY 8.2 ?
2 PsiBlast_PDB 73.2452% 40 - C5 -2DWQ - ? -
100 Fugue 71.0242% - - C5 -5EE0 - OLA1_ORYSJ -
77 HHSearch 67.8540% 30 - C5 -1NI3 - OLA1_SCHPO -
7 PsiBlast_PDB 66.9940% 37 - C5 -1NI3 - OLA1_SCHPO -
87 HHSearch 44.6442%-139 - C5 -1LNZ 3.9 OBG_BACSU
86 HHSearch 42.1346%-103 - C5 -1UDX - OBG_THET8 -
101 Fugue 41.4422% 35 - C5 -1WXQ - ? -
88 HHSearch 40.5542%-120 - C5 -1LNZ - OBG_BACSU -
10 PsiBlast_PDB 40.5137% -97 - C5 -1LNZ - OBG_BACSU -
103 Fugue 37.8815%-105 - C5 -1M2O - SAR1_YEAST -
20 PsiBlast_PDB 37.5146%-127 - C5 -3W5I - ? -