@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0012: (2017-12-13 )
MKKQNNGLIKNPFLWLLFIFFLVTGFQYFYSGNNSGGSQQINYTELVQEITDGNVKELTYQPNGSVIEVSGVYKNPKTSKEGTGIQFFTPSVTKVEKFTSTILPADTTVSELQKLATDHKAEVTVKHESSSGIWINLLVSIVPFGILFFFLFSMMGNMGGGNGRNPMSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQTTGASNDFEQATQMARAMVTEYGMSEKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGKMPEAVEEESHALSYDEVKSKMNDEK

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_B_5(4KO8)
TERA_HUMAN
[Raw transfer]




AGS_A_3(4KO8)
TERA_HUMAN
[Raw transfer]




ADP_C_9(4WW0)
FTSH_AQUAE
[Raw transfer]




ADP_C_8(2R65)
FTSH_HELPY
[Raw transfer]




AGS_A_3(3HU3)
TERA_HUMAN
[Raw transfer]




ADP_A_5(4WW0)
FTSH_AQUAE
[Raw transfer]




ADP_A_2(2QZ4)

[Raw transfer]




ADP_B_7(4WW0)
FTSH_AQUAE
[Raw transfer]




AGS_B_5(3HU3)
TERA_HUMAN
[Raw transfer]




ADP_A_2(5EQT)
PAN_PYRHO
[Raw transfer]




ADP_B_5(3H4M)
PAN_METJA
[Raw transfer]




ADP_C_6(3H4M)
PAN_METJA
[Raw transfer]




ADP_E_10(2R65)
FTSH_HELPY
[Raw transfer]




ADP_B_7(2R65)
FTSH_HELPY
[Raw transfer]




ADP_A_6(2R65)
FTSH_HELPY
[Raw transfer]




ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]




ADP_A_2(1E32)
TERA_MOUSE
[Raw transfer]




ADP_D_9(2R65)
FTSH_HELPY
[Raw transfer]




ADP_G_7(1R7R)
TERA_MOUSE
[Raw transfer]




ADP_A_2(1E32)
TERA_MOUSE
[Raw transfer]




ANP_B_2(1IY0)
FTSH_THET8
[Raw transfer]




ADP_B_2(1IY1)
FTSH_THET8
[Raw transfer]




125 HHSearch 85.5758% -91 - C2 -2DHR - FTSH_THET8 -
112 Fugue 85.4856% -96 - C2 -2CE7 - FTSH_THEMA -
33 PsiBlast_CBE 84.6857% -90 - C2 -2DHR - FTSH_THET8 -
3 PsiBlast_PDB 84.4957% -88 - C2 -2DHR - FTSH_THET8 -
123 HHSearch 84.4556% -56 - C2 -3KDS - FTSH_THEMA -
35 PsiBlast_CBE 84.4357% -89 - C2 -2DHR - FTSH_THET8 -
1 PsiBlast_PDB 84.2257% -63 - C2 -3KDS - FTSH_THEMA -
30 PsiBlast_CBE 84.0657% -82 - C2 -4EIW - FTSH_THET8 -
28 PsiBlast_CBE 83.7657% -83 - C2 -4EIW - FTSH_THET8 -
2 PsiBlast_PDB 83.7357% -83 - C2 -4EIW - FTSH_THET8 -
32 PsiBlast_CBE 80.0157% -80 - C2 -2DHR - FTSH_THET8 -
4 PsiBlast_PDB 79.9255% -50 - C2 -4WW0 8.6 FTSH_AQUAE
124 HHSearch 79.8356% -54 - C2 -2CE7 - FTSH_THEMA -
37 PsiBlast_CBE 79.6655% -43 - C2 -4Z8X - FTSH_AQUAE -
39 PsiBlast_CBE 79.5355% -48 - C2 -4WW0 8.5 FTSH_AQUAE
40 PsiBlast_CBE 79.3355% -41 - C2 -4WW0 8.4 FTSH_AQUAE
34 PsiBlast_CBE 79.2657% -82 - C2 -2DHR - FTSH_THET8 -
5 PsiBlast_PDB 79.2255% -41 - C2 -4Z8X - FTSH_AQUAE -
36 PsiBlast_CBE 79.1157% -81 - C2 -2DHR - FTSH_THET8 -
29 PsiBlast_CBE 78.8957% -81 - C2 -4EIW - FTSH_THET8 -
12 PsiBlast_PDB 72.9072%-109 - C2 -1IY1 5.7 FTSH_THET8
11 PsiBlast_PDB 70.1972%-107 - C2 -1IY0 5.4 FTSH_THET8
42 PsiBlast_CBE 62.1464% -52 - C2 -2R65 5.3 FTSH_HELPY
13 PsiBlast_PDB 59.3151% -94 - C2 -2QZ4 8.2
9 PsiBlast_PDB 58.9664% -55 - C2 -2R65 5.9 FTSH_HELPY
41 PsiBlast_CBE 57.6464% -45 - C2 -2R65 5.9 FTSH_HELPY
44 PsiBlast_CBE 57.1464% -46 - C2 -2R65 5.3 FTSH_HELPY
43 PsiBlast_CBE 56.5364% -36 - C2 -2R65 6.7 FTSH_HELPY
88 PsiBlast_CBE 55.2046% 7 - C2 -3HU3 8.3 TERA_HUMAN
87 PsiBlast_CBE 55.1346% 8 - C2 -4KO8 7.9 TERA_HUMAN
86 PsiBlast_CBE 55.1246% 9 - C2 -4KO8 7.6 TERA_HUMAN
89 PsiBlast_CBE 55.0746% 6 - C2 -3HU3 8.0 TERA_HUMAN
46 PsiBlast_CBE 54.7749% 12 - C2 -3H4M 6.8 PAN_METJA
14 PsiBlast_PDB 54.4949% 14 - C2 -3H4M 7.1 PAN_METJA
19 PsiBlast_PDB 52.6848% 23 - C2 -5EQT 7.6 PAN_PYRHO
45 PsiBlast_CBE 52.2449% 24 - C2 -3H4M 6.3 PAN_METJA
102 PsiBlast_CBE 47.4047% 3 - C2 -1E32 6.4 TERA_MOUSE
67 PsiBlast_CBE 47.1947% 1 - C2 -1R7R 5.0 TERA_MOUSE
114 Fugue 46.4131% -13 - C2 -1E32 6.5 TERA_MOUSE