@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0021: (2017-12-13 )
MTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIFFPEKISVIGNGMVVNPKSLVKELSYLHEEGVTTDNLRISDRAHVILPYHIELDRLQEEAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFRERLERNLAEKNRLFEKLYDSKAIVFDDIFEEYYEYGQQIKKYVIDTSVILNDALDNGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLPENARNYVRRVSELVGVRISTFSVGPGREQTNILESVWS

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGS_A_5(1NHT)
PURA_ECOLI
[Raw transfer]




RPD_A_5(1QF4)
PURA_ECOLI
[Raw transfer]




DOI_A_3(2DGN)
PURA1_MOUSE
[Raw transfer]




PGS_A_5(1KSZ)
PURA_ECOLI
[Raw transfer]




2SA_A_5(1MEZ)
PURA1_MOUSE
[Raw transfer]




DOI_A_3(2GCQ)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




IMP_C_3(1KJX)
PURA_ECOLI
[Raw transfer]




RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]




IMP_A_8(1IWE)
PURA1_MOUSE
[Raw transfer]




AMP_A_3(4M9D)
PURA_BACAN
[Raw transfer]




AMP_B_8(4M9D)
PURA_BACAN
[Raw transfer]




IMP_E_5(1KKB)
PURA_ECOLI
[Raw transfer]




IMP_A_5(1KKF)
PURA_ECOLI
[Raw transfer]




AMP_E_5(1MF1)
PURA1_MOUSE
[Raw transfer]




AMP_C_3(1SON)
PURA_ECOLI
[Raw transfer]




H5P_A_6(1SOO)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1GIN)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG0)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_A_4(1CIB)
PURA_ECOLI
[Raw transfer]




GPX_A_4(1CH8)
PURA_ECOLI
[Raw transfer]




GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_A_4(2GCQ)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]




GDP_A_4(1JUY)
PURA_ECOLI
[Raw transfer]




GCP_A_3(1HOP)
PURA_ECOLI
[Raw transfer]




GDP_A_6(1LNY)
PURA1_MOUSE
[Raw transfer]




GDP_A_6(1GIM)
PURA_ECOLI
[Raw transfer]




GDP_C_3(1DJ3)
PURA_WHEAT
[Raw transfer]




GDP_A_5(1LON)
PURA1_MOUSE
[Raw transfer]




DPO_A_3(1KKF)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG3)
PURA_ECOLI
[Raw transfer]




GCP_B_4(1HOP)
PURA_ECOLI
[Raw transfer]




GDP_A_4(1CG4)
PURA_ECOLI
[Raw transfer]




GDP_A_5(1CG1)
PURA_ECOLI
[Raw transfer]




GTP_C_3(1LOO)
PURA1_MOUSE
[Raw transfer]




GDP_A_5(1MF0)
PURA1_MOUSE
[Raw transfer]




GDP_D_4(1DJ2)
PURA_ARATH
[Raw transfer]




GDP_A_4(2DGN)
PURA1_MOUSE
[Raw transfer]




GDP_B_7(1LNY)
PURA1_MOUSE
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]




GNH_A_3(1HOO)
PURA_ECOLI
[Raw transfer]




IMP_B_7(1IWE)
PURA1_MOUSE
[Raw transfer]




GNH_A_3(1HON)
PURA_ECOLI
[Raw transfer]




GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]




HAD_C_3(1KKB)
PURA_ECOLI
[Raw transfer]




CIT_A_2(3R7T)
PURA_CAMJE
[Raw transfer]




2 PsiBlast_PDB 95.8374% -75 - C6 -4M9D 6.6 PURA_BACAN
1 PsiBlast_PDB 95.7574% -87 - C6 -4M0G - PURA_BACAN -
56 HHSearch 88.2275% -27 - C6 -4M9D 6.6 PURA_BACAN
6 PsiBlast_PDB 74.9948% -8 - C6 -1QF5 7.0 PURA_ECOLI
14 PsiBlast_PDB 74.8448% -7 - C6 -1GIM 7.6 PURA_ECOLI
15 PsiBlast_PDB 74.6748% -10 - C6 -1GIN 6.6 PURA_ECOLI
24 PsiBlast_CBE 74.6348% -4 - C6 -1KKF 7.2 PURA_ECOLI
10 PsiBlast_PDB 74.5948% -9 - C6 -1SOO 5.2 PURA_ECOLI
25 PsiBlast_CBE 74.4648% -12 - C6 -3HID - PURA_YERPE -
4 PsiBlast_PDB 74.4148% -5 - C6 -1CH8 7.4 PURA_ECOLI
9 PsiBlast_PDB 74.3348% -9 - C6 -1SON 5.4 PURA_ECOLI
7 PsiBlast_PDB 74.3148% -5 - C6 -1CIB 6.7 PURA_ECOLI
5 PsiBlast_PDB 74.3148% -4 - C6 -1QF4 7.4 PURA_ECOLI
20 PsiBlast_PDB 74.2548% -7 - C6 -1KKB 6.6 PURA_ECOLI
13 PsiBlast_PDB 74.1848% -10 - C6 -1HOO 6.8 PURA_ECOLI
28 PsiBlast_CBE 74.0647% -5 - C6 -1CG3 7.3 PURA_ECOLI
55 HHSearch 73.9849% -0 * C6 *1QF5 7.0 PURA_ECOLI
22 PsiBlast_CBE 73.9748% -17 - C6 -1HOP 5.6 PURA_ECOLI
8 PsiBlast_PDB 73.8748% -5 - C6 -2GCQ 8.5 PURA_ECOLI
3 PsiBlast_PDB 73.8548% -6 - C6 -1CG0 7.5 PURA_ECOLI
16 PsiBlast_PDB 73.7648% -7 - C6 -1KSZ 6.5 PURA_ECOLI
27 PsiBlast_CBE 73.6247% -6 - C6 -1CG4 7.5 PURA_ECOLI
26 PsiBlast_CBE 73.5847% -6 - C6 -1CG1 6.9 PURA_ECOLI
21 PsiBlast_CBE 73.5548% -14 - C6 -1HOP 5.5 PURA_ECOLI
18 PsiBlast_PDB 73.3448% -5 - C6 -1JUY 7.6 PURA_ECOLI
23 PsiBlast_CBE 73.2948% -11 - C6 -1HON 6.1 PURA_ECOLI
19 PsiBlast_PDB 73.2848% -5 - C6 -1KJX 5.5 PURA_ECOLI
17 PsiBlast_PDB 73.2848% -7 - C6 -1NHT 6.8 PURA_ECOLI
45 PsiBlast_CBE 72.2045% -4 - C6 -1IWE 5.8 PURA1_MOUSE
41 PsiBlast_CBE 71.6645% -2 - C6 -1LOO 5.6 PURA1_MOUSE
37 PsiBlast_CBE 71.6245% -3 - C6 -2DGN 7.8 PURA1_MOUSE
46 PsiBlast_CBE 71.5445% 0 - C6 -1IWE 6.2 PURA1_MOUSE
44 PsiBlast_CBE 71.0345% 0 - C6 -1LNY 6.2 PURA1_MOUSE
47 PsiBlast_CBE 71.0242% -8 - C6 -2V40 5.7 PURA2_HUMAN
38 PsiBlast_CBE 70.9845% 0 - C6 -1MF1 5.7 PURA1_MOUSE
43 PsiBlast_CBE 70.8645% -1 - C6 -1LNY 6.4 PURA1_MOUSE
40 PsiBlast_CBE 70.8245% -1 - C6 -1MEZ 7.1 PURA1_MOUSE
67 HHSearch 70.7840% -11 - C6 -1P9B 7.4 PURA_PLAFA
42 PsiBlast_CBE 70.7245% -2 - C6 -1LON 6.1 PURA1_MOUSE
71 Fugue 70.5647% 11 - C6 -1QF5 7.0 PURA_ECOLI
66 HHSearch 70.1645% -27 - C6 -3R7T 3.3 PURA_CAMJE
39 PsiBlast_CBE 70.1645% -2 - C6 -1MF0 5.6 PURA1_MOUSE
61 HHSearch 69.9346% 5 - C6 -1DJ2 6.3 PURA_ARATH
34 PsiBlast_CBE 68.7646% 3 - C6 -1DJ2 6.3 PURA_ARATH
33 PsiBlast_CBE 68.5046% 6 - C6 -1DJ2 5.8 PURA_ARATH
58 HHSearch 68.3144% 5 - C6 -1DJ3 6.4 PURA_WHEAT
32 PsiBlast_CBE 67.9644% -1 - C6 -1DJ3 6.0 PURA_WHEAT
31 PsiBlast_CBE 67.4944% -0 - C6 -1DJ3 6.4 PURA_WHEAT
48 PsiBlast_CBE 67.0041% 7 - C6 -1P9B 7.7 PURA_PLAFA