@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0022: (2017-12-13 )
MYYTLEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEDANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYDILTDERLNHRVEVETGILEDECAAIMQDFFRNRRKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HPY_B_6(2O3K)
FCY1_YEAST
[Raw transfer]




HPY_B_7(1P6O)
FCY1_YEAST
[Raw transfer]




GOL_B_12(2B3J)
TADA_STAAM
[Raw transfer]




GOL_C_15(5JFY)
?
[Raw transfer]




59 HHSearch 89.8172%-132 - C6 -2NX8 - TADA_STRP6 -
1 PsiBlast_PDB 88.6471%-127 - C6 -2NX8 - TADA_STRP6 -
58 HHSearch 81.9347%-133 - C6 -2B3J - TADA_STAAM -
57 HHSearch 80.7547%-125 * C6 *2B3J 2.1 TADA_STAAM
3 PsiBlast_PDB 80.7148%-132 - C6 -1Z3A - TADA_ECOLI -
56 HHSearch 79.7846%-127 - C6 -1Z3A - TADA_ECOLI -
22 PsiBlast_CBE 79.4849%-138 - C6 -2B3J - TADA_STAAM -
21 PsiBlast_CBE 79.1149%-129 - C6 -2B3J - TADA_STAAM -
23 PsiBlast_CBE 78.1349%-131 - C6 -2B3J - TADA_STAAM -
5 PsiBlast_PDB 77.6844%-127 - C6 -1WWR - TADA_AQUAE -
2 PsiBlast_PDB 76.7349%-132 - C6 -2B3J - TADA_STAAM -
62 HHSearch 76.3142%-122 - C6 -1WWR - TADA_AQUAE -
61 HHSearch 75.9342%-115 - C6 -1WWR - TADA_AQUAE -
4 PsiBlast_PDB 75.5447%-127 - C6 -3OCQ - ? -
63 HHSearch 68.5241%-126 - C6 -2A8N - TADA_AGRFC -
6 PsiBlast_PDB 67.3533% -69 - C6 -3DH1 - ADAT2_HUMAN -
66 HHSearch 66.1533% -78 - C6 -3DH1 - ADAT2_HUMAN -
64 HHSearch 64.5941%-120 - C6 -2A8N - TADA_AGRFC -
7 PsiBlast_PDB 64.3240%-120 - C6 -2A8N - TADA_AGRFC -
73 HHSearch 59.1533% -18 - C6 -3ZPG - ? -