@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0052: (2017-12-14 )
MKLLVVGSGGREHAIAKKLLESKDVEKVFVAPGNDGMTLDGLELVNISISEHSKLIDFAKTNDVAWTFIGPDDALAAGIVDDFNQAGLKAFGPTRAAAELEWSKDFAKEIMVKYGVSTAAYGTFSDFEEAKAYIEKHGAPIVVKADGLALGKGVVVAETVEQAVEAAHEMLLDNKFGDSGARVVIEEFLEGEEFSLFAFVNGDKFYIMPTAQDHKRAYDGDKGPNTGGMGAYAPVPHLPQSVVDTAVDTIVKPVLEGIIKEGRPYLGVIYAGLILTADGPKVIEFNSRFGDPETQIILPRLTSDFAQNITDILDGKEPNIMWTDKGVTLGVVVASKGYPLDYERGVELPAKTEGDVITYYAGAKFAENSRALLSNGGRVYMLVTTADTVKEAQASIYQELSQQKIEGLFYRTDIGSKAIK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(2YW2)
PUR2_AQUAE
[Raw transfer]



ATP_A_5(2YW2)
PUR2_AQUAE
[Raw transfer]



ATP_B_6(2YW2)
PUR2_AQUAE
[Raw transfer]



ANP_A_2(2XCL)
PUR2_BACSU
[Raw transfer]



ANP_A_2(2XCL)
PUR2_BACSU
[Raw transfer]



ADP_A_5(2XD4)
PUR2_BACSU
[Raw transfer]



ADP_A_5(2XD4)
PUR2_BACSU
[Raw transfer]



ATP_A_8(2QK4)
PUR2_HUMAN
[Raw transfer]



ATP_A_8(2QK4)
PUR2_HUMAN
[Raw transfer]



GOL_A_2(3MJF)
PUR2_YERPE
[Raw transfer]



AMP_A_3(2YS6)
?
[Raw transfer]



AMP_A_4(2YRX)
?
[Raw transfer]



GLY_A_2(2YS6)
?
[Raw transfer]
3 PsiBlast_PDB 86.4253% -81 - C1 -2YS6 2.3 ?
2 PsiBlast_PDB 85.8553% -81 - C1 -2YRX - ? -
1 PsiBlast_PDB 84.4253% -83 - C1 -2YRW - ? -
22 PsiBlast_CBE 83.3048% -67 - C1 -2YW2 6.0 PUR2_AQUAE
8 PsiBlast_PDB 83.2948% -66 - C1 -2YW2 6.3 PUR2_AQUAE
5 PsiBlast_PDB 82.7553% -59 - C1 -2XD4 4.9 PUR2_BACSU
9 PsiBlast_PDB 82.4348% -68 - C1 -2YYA - PUR2_AQUAE -
6 PsiBlast_PDB 82.4052% -66 - C1 -2XCL 5.3 PUR2_BACSU
45 HHSearch 79.5651% 7 - C1 -2YRX 3.6 ?
12 PsiBlast_PDB 79.5445% -9 - C1 -3MJF - PUR2_YERPE -
44 HHSearch 79.1151% 10 - C1 -2YS6 4.5 ?
7 PsiBlast_PDB 78.0847% -63 - C1 -5VEV - ? -
14 PsiBlast_PDB 78.0242% -73 - C1 -2IP4 - ? -
11 PsiBlast_PDB 78.0144% 4 - C1 -2QK4 5.7 PUR2_HUMAN
21 PsiBlast_CBE 77.2147% -63 - C1 -5VEV - ? -
13 PsiBlast_PDB 75.1839% -11 - C1 -3LP8 - ? -
46 HHSearch 74.6145% 12 - C1 -3MJF 2.7 PUR2_YERPE
39 HHSearch 74.5646% 40 - C1 -2YW2 6.3 PUR2_AQUAE
38 HHSearch 74.0449% 15 - C1 -2XCL 5.3 PUR2_BACSU
37 HHSearch 73.6549% 19 - C1 -2XD4 4.9 PUR2_BACSU
43 HHSearch 72.3242% 39 * C1 *2QK4 5.7 PUR2_HUMAN