@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0053: (2017-12-14 )
MIVEKEEKGEEMKPVISIIMGSKSDWATMQKTAEVLDRFGVAYEKKVVSAHRTPDLMFKHAEEARSRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKSRALSGVDSLYSIVQMPGGVPVATMAIGEAGATNAALFALRLLSVEDKSIADALANFAEEQGKIAEESSNELI

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C2R_I_9(2NSL)
PURE_ECOLI
[Raw transfer]




NIA_A_2(2NSH)
PURE_ECOLI
[Raw transfer]




AIR_A_3(5CLJ)
?
[Raw transfer]




C2R_I_9(2NSJ)
PURE_ECOLI
[Raw transfer]




AIR_A_3(5CLI)
?
[Raw transfer]




AIR_I_9(2FWJ)
?
[Raw transfer]




AIR_A_3(2FWI)
?
[Raw transfer]




CIT_M_13(2FWP)
?
[Raw transfer]




CIT_B_3(2FW6)
?
[Raw transfer]




CIT_A_4(5CVT)
?
[Raw transfer]




CIT_B_6(5CVT)
?
[Raw transfer]




RP5_A_7(4Z7J)
?
[Raw transfer]




CIT_A_3(1U11)
?
[Raw transfer]




CIT_B_3(5CLG)
?
[Raw transfer]




CIT_B_5(5CLJ)
?
[Raw transfer]




FMT_D_25(3OPQ)
?
[Raw transfer]




AIR_B_6(3RGG)
PURE_TREDE
[Raw transfer]




FMT_A_7(3LP6)
PURE_MYCTU
[Raw transfer]




GOL_B_9(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_A_7(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_C_21(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_C_21(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_D_23(3LP6)
PURE_MYCTU
[Raw transfer]




CIT_B_4(1U11)
?
[Raw transfer]




CIT_B_4(1U11)
?
[Raw transfer]




FMT_D_26(3LP6)
PURE_MYCTU
[Raw transfer]




EDO_A_3(5CLF)
?
[Raw transfer]




EDO_B_10(4Z7J)
?
[Raw transfer]




EDO_B_6(5CLF)
?
[Raw transfer]




EDO_A_4(4ZC8)
?
[Raw transfer]




ACY_I_9(2FW1)
?
[Raw transfer]




ACY_M_13(2FW1)
?
[Raw transfer]




EDO_A_5(4ZC8)
?
[Raw transfer]




101 HHSearch 97.1662%-160 - C4 -3OPQ 3.3 ?
98 HHSearch 96.1364%-154 - C4 -1XMP - ? -
106 HHSearch 95.8462%-156 - C4 -3OOW - ? -
5 PsiBlast_PDB 94.8561%-166 - C4 -3OOW - ? -
97 HHSearch 94.6162%-152 * C4 *4AY3 - ? -
6 PsiBlast_PDB 93.4661%-160 - C4 -3OPQ - ? -
83 Fugue 91.9655%-169 - C4 -1O4V - PURE_THEMA -
4 PsiBlast_PDB 91.2667%-153 - C4 -1XMP - ? -
93 HHSearch 91.1255%-163 - C4 -3KUU - ? -
92 HHSearch 90.7857%-156 - C4 -3ORS - ? -
2 PsiBlast_PDB 90.7066%-156 - C4 -4AY3 - ? -
3 PsiBlast_PDB 90.2366%-154 - C4 -4AY4 - ? -
100 HHSearch 89.7556%-165 - C4 -1D7A - PURE_ECOLI -
94 HHSearch 89.5252%-158 - C4 -4YCB - ? -
49 PsiBlast_CBE 88.7551%-170 - C4 -3LP6 3.4 PURE_MYCTU
55 PsiBlast_CBE 88.5557%-167 - C4 -4YCB - ? -
7 PsiBlast_PDB 88.5254%-169 - C4 -1O4V - PURE_THEMA -
105 HHSearch 88.3754%-169 - C4 -1O4V - PURE_THEMA -
99 HHSearch 87.8952%-158 - C4 -1U11 3.7 ?
50 PsiBlast_CBE 87.8451%-171 - C4 -3LP6 3.6 PURE_MYCTU
61 PsiBlast_CBE 87.7760%-169 - C4 -2NSL 6.1 PURE_ECOLI
103 HHSearch 87.5550%-168 - C4 -3LP6 3.6 PURE_MYCTU
51 PsiBlast_CBE 87.2751%-169 - C4 -3LP6 3.6 PURE_MYCTU
63 PsiBlast_CBE 87.1760%-163 - C4 -2NSH 5.7 PURE_ECOLI
67 PsiBlast_CBE 87.1157%-166 - C4 -5CVT 2.9 ?
62 PsiBlast_CBE 86.9260%-165 - C4 -2NSJ 5.9 PURE_ECOLI
52 PsiBlast_CBE 86.5951%-167 - C4 -3LP6 3.4 PURE_MYCTU
66 PsiBlast_CBE 85.9957%-164 - C4 -5CVT 3.0 ?
102 HHSearch 85.7650%-165 - C4 -3LP6 3.4 PURE_MYCTU
9 PsiBlast_PDB 75.7762%-136 - C4 -2FWJ 4.7 ?
14 PsiBlast_PDB 75.4961%-137 - C4 -4ZC8 3.3 ?
16 PsiBlast_PDB 74.9761%-137 - C4 -4Z7J 3.4 ?
33 PsiBlast_CBE 74.9161%-141 - C4 -4Z7J 3.5 ?
10 PsiBlast_PDB 74.7562%-136 - C4 -5CLF 3.7 ?
37 PsiBlast_CBE 74.5761%-135 - C4 -5CLJ 4.4 ?
27 PsiBlast_CBE 74.4262%-137 - C4 -5CLF 3.6 ?
36 PsiBlast_CBE 74.2461%-128 - C4 -5CLJ 4.1 ?
28 PsiBlast_CBE 74.1162%-135 - C4 -2FW1 3.3 ?
29 PsiBlast_CBE 73.9662%-136 - C4 -1U11 3.7 ?
40 PsiBlast_CBE 73.7261%-129 - C4 -2FWP 4.2 ?
53 PsiBlast_CBE 73.7061%-136 - C4 -2FWI 3.8 ?
8 PsiBlast_PDB 73.5962%-135 - C4 -2FW1 3.6 ?
39 PsiBlast_CBE 73.4361%-128 - C4 -5CLG 3.9 ?
11 PsiBlast_PDB 73.1562%-133 - C4 -5CLI 4.6 ?
12 PsiBlast_PDB 72.9062%-135 - C4 -1U11 3.8 ?
41 PsiBlast_CBE 72.2261%-129 - C4 -2FW6 3.7 ?
80 PsiBlast_CBE 66.4034% -86 - C4 -3RGG 3.7 PURE_TREDE