@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0054: (2017-12-14 )
MRMHLPTLLKNKEKSQRSRQMSSSKTIGIIGGGQLGQMMAISAIYMGHKVIALDPAADCPASRVAEIIVAPYNDVDALRQLADRCDVLTYEFENVDADGLDAVIKDGQLPQGTDLLRISQNRIFEKDFLSNKSQVTVAPYKVVTSSLDLADIDLSKNYVLKTATGGYDGHGQKVIRSEADLEAAYALADSADCVLEEFVNFDLEISVIVSGNGKEVTFFPVQENIHRNNILSKTIVPARISESLVDKAKAMAVRIAEQLNLSGTLCVEMFATDDDVIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGAPLPVIKLHAPAVMLNVLGQHVEAAEQYVTENSSAHLHMYGKIEAKHNRKMGHVTLFSDVPDSVDELGEGIDF

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_3(3V4S)
?
[Raw transfer]



ATP_B_6(3V4S)
?
[Raw transfer]



ADP_A_3(3QFF)
?
[Raw transfer]



ADP_A_3(3R5H)
?
[Raw transfer]



ATP_B_12(4DLK)
?
[Raw transfer]



ATP_B_12(4DLK)
?
[Raw transfer]



ANP_A_2(4MA5)
?
[Raw transfer]



ADP_B_4(3QFF)
?
[Raw transfer]



A12_A_3(4MAM)
?
[Raw transfer]



ADP_A_4(3ORQ)
?
[Raw transfer]



ADP_A_4(3ORQ)
?
[Raw transfer]



ADP_B_6(3R5H)
?
[Raw transfer]



A12_A_3(4MAM)
?
[Raw transfer]



AMP_B_5(3AW8)
?
[Raw transfer]



AMP_A_3(3AW8)
?
[Raw transfer]



AMP_A_3(3AW8)
?
[Raw transfer]



AMP_A_2(4MA0)
?
[Raw transfer]



ATP_A_7(4DLK)
?
[Raw transfer]



ADP_A_2(5JQW)
?
[Raw transfer]



ATP_A_8(4DLK)
?
[Raw transfer]
1 PsiBlast_PDB 81.1750% -2 - C2 -4DLK 4.3 ?
5 PsiBlast_PDB 80.7650% 4 - C2 -3V4S 7.4 ?
4 PsiBlast_PDB 80.5350% 1 - C2 -3R5H 6.8 ?
2 PsiBlast_PDB 80.4550% 3 - C2 -3Q2O - ? -
21 PsiBlast_CBE 80.1950% 2 - C2 -4DLK 6.6 ?
3 PsiBlast_PDB 80.1550% 2 - C2 -3QFF 6.7 ?
22 PsiBlast_CBE 79.8750% 1 - C2 -3R5H 5.9 ?
25 PsiBlast_CBE 79.8550% 1 - C2 -3V4S 7.7 ?
23 PsiBlast_CBE 79.7350% 3 - C2 -3QFF 5.4 ?
70 HHSearch 79.3448% 13 - C2 -3Q2O - ? -
73 HHSearch 79.0449% 15 * C2 *4DLK 4.7 ?
72 HHSearch 74.8839% -13 - C2 -4E4T - ? -
74 HHSearch 74.0147% 23 - C2 -3ORQ 5.3 ?
71 HHSearch 73.3339% -16 - C2 -4E4T - ? -
8 PsiBlast_PDB 73.0538% -11 - C2 -4E4T - ? -
6 PsiBlast_PDB 69.7946% 14 - C2 -3ORQ 5.4 ?
82 HHSearch 69.7739% -3 - C2 -3AX6 - ? -
83 HHSearch 69.5239% -0 - C2 -3AX6 - ? -
77 HHSearch 69.1736% -16 - C2 -3AW8 4.6 ?
16 PsiBlast_PDB 68.9732% -24 - C2 -4MAM 7.2 ?
15 PsiBlast_PDB 68.0132% -24 - C2 -4MA0 5.5 ?
14 PsiBlast_PDB 67.8632% -30 - C2 -4MA5 5.3 ?
81 HHSearch 66.4031% 5 - C2 -4MAM 7.5 ?
9 PsiBlast_PDB 63.9237% 7 - C2 -3AW8 4.6 ?
27 PsiBlast_CBE 63.6637% 11 - C2 -3AW8 5.5 ?
13 PsiBlast_PDB 51.8932% 1 - C2 -5JQW 3.2 ?