@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0057: (2017-12-14 )
MKHEKQQRFSIRKYAVGAASVLIGFAFQAQTVAADGVTPTTTENQPTIHTVSDSPQSSENRTEETPKAELQPEAPKTVETETPATDKVASLPKTEEKPQEEVSSTPSDKAEVVTPTSAEKETANKKEEEASPKKEEAKEVDSKESNTDKTDKDKPAKKDEAKAEADKPETETGKERAATVNEKLAKKKIVSIDAGRKYFSPEQLKEIIDKAKHYGYTDLHLLVGNDGLRFMLDDMSITANGKTYASDDVKRAIEKGTNDYYNDPNGNHLTESQMTDLINYAKDKGIGLIPTVNSPGHMDAILNAMKELGIQNPNFSYFGKKSARTVDLDNEQAVAFTKALIDKYAAYFAKKTEIFNIGLDEYANDATDAKGWSVLQADKYYPNEGYPVKGYEKFIAYANDLARIVKSHGLKPMAFNDGIYYNSDTSFGSFDKDIIVSMWTGGWGGYDVASSKLLAEKGHQILNTNDAWCYVLGRNADGQGWYNLDQGLNGIKNTPITSVPKTEGADIPIIGGMVAAWADTPSARYSPSHLFKLMRHFANANAEYFAADYESAEQALNEVPKDLNRYTAESVAAVKEAEKAIRSLDSNLSRAQQDTIDQAIAKLQETVNNLTLTPEAQKEEEAKREVEKLAKNKVISIDAGRKYFTLDQLKRIVDKASELGYSDVHLLLGNDGLRFLLNDMTITANGKTYASDDVKKAIIEGTKAYYDDPNGTALTQAEVTELIEYAKSKDIGLIPAINSPGHMDAMLVAMEKLGIKNPQAHFDKVSKTTMDLKNEEAMNFVKALIGKYMDFFAGKTKIFNFGTDEYANDATSAQGWYYLKWYQLYGKFAEYANTLAAMAKERGLQPMAFNDGFYYEDKDDVQFDKDVLISYWSKGWWGYNLASPQYLASKGYKFLNTNGDWYYVIGNHKQDEAYPLSKAVENSGKVPFNQLASTKYPEVDLPTVGSMLSIWADRPSAEYKEEEIFELMTAFADHNKDYFRANYNALREELAKIPTNLEGYSKESLEALDAAKTALNYNLNRNKQAELDTLVANLKAALQGLKPAATHSGSLDENEVAANVETRPELITRTEEIPFEVIKKENPNLPAGQENIITAGVKGERTHYISVLTENGKTTETVLDSQVTKEVINQVVEVGSPVTHKGDESGLAPTTEVKPRLDIQEEEIPFTTVTRENPLLLKGKTQVITKGVNGHRSNFYSVSTSADGKEVKTLVNSVVAQEAVTQIVEVGTMVTHVGDENGQAAIAEEKPKLEIPSQPAPSTAPAEESKALPQDPAPVVTEKKLPETGTHDSAELVVAGLMSTLAAYGLTKRKED

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LOG_A_2(4AZ7)
STRH_STRPN
[Raw transfer]



OAN_A_2(4AZ6)
STRH_STRPN
[Raw transfer]



OAN_A_2(4AZB)
STRH_STRPN
[Raw transfer]



OAN_A_2(4AZ6)
STRH_STRPN
[Raw transfer]



OAN_B_11(4AZI)

[Raw transfer]



NGW_A_2(4AZ5)
STRH_STRPN
[Raw transfer]



NAG_A_3(3RPM)
?
[Raw transfer]



GOL_C_3(1YHT)
?
[Raw transfer]



EDO_A_3(4AZ6)
STRH_STRPN
[Raw transfer]



SUGAR_A_13(2YL8)
STRH_STRPN
[Raw transfer]
-
EDO_A_6(2YLL)
STRH_STRPN
[Raw transfer]



GAL_A_3(5BXP)
?
[Raw transfer]



GAL_A_3(5BXR)
?
[Raw transfer]



EDO_A_9(2YL6)
STRH_STRPN
[Raw transfer]



EDO_A_9(2YL6)
STRH_STRPN
[Raw transfer]
1 PsiBlast_PDB 95.3198% -73 - C3 -3RPM 3.7 ?
4 PsiBlast_PDB 95.1599% -76 - C3 -4AZ5 4.5 STRH_STRPN
7 PsiBlast_PDB 95.0599% -76 - C3 -4AZ7 3.9 STRH_STRPN
2 PsiBlast_PDB 94.9198% -75 - C3 -2YLL 3.2 STRH_STRPN
6 PsiBlast_PDB 94.8899% -75 - C3 -4AZ6 6.1 STRH_STRPN
5 PsiBlast_PDB 94.5899% -75 - C3 -2YL8 4.8 STRH_STRPN
3 PsiBlast_PDB 94.3799% -74 - C3 -2YL6 2.8 STRH_STRPN
57 HHSearch 92.5496% -76 - C3 -4AZC - STRH_STRPN -
35 PsiBlast_CBE 92.4495% -81 - C3 -2YL9 - -
22 PsiBlast_CBE 92.3995% -77 - C3 -4AZC - -
14 PsiBlast_PDB 92.3495% -83 - C3 -2YL9 - STRH_STRPN -
33 PsiBlast_CBE 92.1695% -77 - C3 -2YLA - STRH_STRPN -
13 PsiBlast_PDB 90.8495% -77 - C3 -4AZH - STRH_STRPN -
24 PsiBlast_CBE 90.8395% -81 - C3 -2YL5 - -
12 PsiBlast_PDB 90.8195% -78 - C3 -4AZG - STRH_STRPN -
23 PsiBlast_CBE 90.6695% -76 - C3 -4AZC - STRH_STRPN -
31 PsiBlast_CBE 90.6495% -80 - C3 -2YLA - -
37 PsiBlast_CBE 90.5595% -82 - C3 -2YL9 - STRH_STRPN -
32 PsiBlast_CBE 90.5395% -77 - C3 -2YLA - STRH_STRPN -
29 PsiBlast_CBE 90.2495% -77 - C3 -4AZH - STRH_STRPN -
8 PsiBlast_PDB 88.0898% -65 - C3 -4AZB 1.6 STRH_STRPN
54 HHSearch 87.9393% -59 - C3 -2YL6 2.8 STRH_STRPN
55 HHSearch 87.5093% -60 - C3 -4AZ6 6.1 STRH_STRPN
58 HHSearch 78.0551% -53 * C3 *4AZI 6.3